RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 TRIML2Q8N7C3 387 aa17.57■□□□□ 0.4
PRKCA-203ENST00000578063 TCEAL3Q969E4 200 aa17.57■□□□□ 0.4
PRKCA-203ENST00000578063 EXOSC8Q96B26 276 aaKnown RBP17.57■□□□□ 0.4
PRKCA-203ENST00000578063 ZBED6CLQ96FA7 236 aaPredicted RBP17.57■□□□□ 0.4
PRKCA-203ENST00000578063 SLC41A2Q96JW4 573 aa17.57■□□□□ 0.4
PRKCA-203ENST00000578063 DPYSL5Q9BPU6 564 aa17.57■□□□□ 0.4
PRKCA-203ENST00000578063 NPLQ9BXD5 320 aaPredicted RBP17.57■□□□□ 0.4
PRKCA-203ENST00000578063 ANKHQ9HCJ1 492 aa17.57■□□□□ 0.4
PRKCA-203ENST00000578063 NEUROD4Q9HD90 331 aa17.57■□□□□ 0.4
PRKCA-203ENST00000578063 PRDM9Q9NQV7 894 aa17.57■□□□□ 0.4
PRKCA-203ENST00000578063 TMEM9Q9P0T7 183 aa17.57■□□□□ 0.4
PRKCA-203ENST00000578063 UTS2RQ9UKP6 389 aa17.57■□□□□ 0.4
PRKCA-203ENST00000578063 DAPP1Q9UN19 280 aa17.57■□□□□ 0.4
PRKCA-203ENST00000578063 GMEB1Q9Y692 573 aa17.57■□□□□ 0.4
PRKCA-203ENST00000578063 SPACA6W5XKT8 324 aa17.57■□□□□ 0.4
PRKCA-203ENST00000578063 ADAMTS9Q9P2N4 1935 aa17.57■□□□□ 0.4
PRKCA-203ENST00000578063 EVPLLA8MZ36 301 aa17.56■□□□□ 0.4
PRKCA-203ENST00000578063 CPNE6O95741 557 aa17.56■□□□□ 0.4
PRKCA-203ENST00000578063 IL1RNP18510 177 aa17.56■□□□□ 0.4
PRKCA-203ENST00000578063 SNRPNP63162 240 aaKnown RBP17.56■□□□□ 0.4
PRKCA-203ENST00000578063 HBA1P69905 142 aa17.56■□□□□ 0.4
PRKCA-203ENST00000578063 CCNIQ14094 377 aa17.56■□□□□ 0.4
PRKCA-203ENST00000578063 CLPPQ16740 277 aaPredicted RBP17.56■□□□□ 0.4
PRKCA-203ENST00000578063 PRSS53Q2L4Q9 553 aa17.56■□□□□ 0.4
PRKCA-203ENST00000578063 TMTC4Q5T4D3 741 aa17.56■□□□□ 0.4
PRKCA-203ENST00000578063 D2HGDHQ8N465 521 aa17.56■□□□□ 0.4
PRKCA-203ENST00000578063 OR5P2Q8WZ92 322 aa17.56■□□□□ 0.4
PRKCA-203ENST00000578063 AURKBQ96GD4 344 aaPredicted RBP17.56■□□□□ 0.4
PRKCA-203ENST00000578063 NUDT22Q9BRQ3 303 aa17.56■□□□□ 0.4
PRKCA-203ENST00000578063 IKZF5Q9H5V7 419 aa17.56■□□□□ 0.4
PRKCA-203ENST00000578063 KAT8Q9H7Z6 458 aaKnown RBP17.56■□□□□ 0.4
PRKCA-203ENST00000578063 ENAMQ9NRM1 1142 aa17.56■□□□□ 0.4
PRKCA-203ENST00000578063 STARD5Q9NSY2 213 aa17.56■□□□□ 0.4
PRKCA-203ENST00000578063 ACSS1Q9NUB1 689 aaPredicted RBP17.56■□□□□ 0.4
PRKCA-203ENST00000578063 TAS2R9Q9NYW1 312 aa17.56■□□□□ 0.4
PRKCA-203ENST00000578063 CORO2BQ9UQ03 480 aa17.56■□□□□ 0.4
PRKCA-203ENST00000578063 NAALAD2Q9Y3Q0 740 aa17.56■□□□□ 0.4
PRKCA-203ENST00000578063 GOLGA4Q13439 2230 aaKnown RBP17.56■□□□□ 0.4
PRKCA-203ENST00000578063 RPLP0P05388 317 aaKnown RBP17.55■□□□□ 0.4
PRKCA-203ENST00000578063 MSL3P1P0C860 447 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 CPN2P22792 545 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 HTR1EP28566 365 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 NTSP30990 170 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 TLX1P31314 330 aaPredicted RBP17.55■□□□□ 0.4
PRKCA-203ENST00000578063 GRK6P43250 576 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 EMP3P54852 163 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 LIM2P55344 173 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 PCBP4P57723 403 aaKnown RBP17.55■□□□□ 0.4
PRKCA-203ENST00000578063 MLC1Q15049 377 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 FXNQ16595 210 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 SNAP47Q5SQN1 464 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 SLC48A1Q6P1K1 146 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 IFNEQ86WN2 208 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 PTRH1Q86Y79 214 aaKnown RBP17.55■□□□□ 0.4
PRKCA-203ENST00000578063 TNIP2Q8NFZ5 429 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 KLHL6Q8WZ60 621 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 TRIM15Q9C019 465 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 PCDHAC1Q9H158 963 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 LRRN3Q9H3W5 708 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 ZNF768Q9H5H4 540 aaKnown RBP17.55■□□□□ 0.4
PRKCA-203ENST00000578063 SLC35C2Q9NQQ7 365 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 GIMAP4Q9NUV9 329 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 IRAK4Q9NWZ3 460 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 KCMF1Q9P0J7 381 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 C5AR2Q9P296 337 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 ERVK-11Q9UQG0 969 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 LAMA1P25391 3075 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 LNP1A1A4G5 178 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 FITM1A5D6W6 292 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 CLIC1O00299 241 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 FKBP6O75344 327 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 PSMG1O95456 288 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 CTSBP07858 339 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 ABCB1P08183 1280 aaPredicted RBP17.55■□□□□ 0.4
PRKCA-203ENST00000578063 ANKRD34CP0C6C1 535 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 NELFEP18615 380 aaKnown RBP17.55■□□□□ 0.4
PRKCA-203ENST00000578063 SEPHS1P49903 392 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 GAB1Q13480 694 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 RUNX2Q13950 521 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 FAM53BQ14153 422 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 C18orf63Q68DL7 685 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 DHFR2Q86XF0 187 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 PDSS2Q86YH6 399 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 BHLHE22Q8NFJ8 381 aaPredicted RBP17.55■□□□□ 0.4
PRKCA-203ENST00000578063 ZFP28Q8NHY6 868 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 IFI44Q8TCB0 444 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 DCLRE1BQ9H816 532 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 TPT1P8Q9HAU6 139 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 GMPR2Q9P2T1 348 aaKnown RBP17.55■□□□□ 0.4
PRKCA-203ENST00000578063 PSME2Q9UL46 239 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 ENTPD4Q9Y227 616 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 PCDHB3Q9Y5E6 796 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 SNX13Q9Y5W8 968 aa17.55■□□□□ 0.4
PRKCA-203ENST00000578063 RETP07949 1114 aa17.54■□□□□ 0.4
PRKCA-203ENST00000578063 MANFP55145 182 aaKnown RBP17.54■□□□□ 0.4
PRKCA-203ENST00000578063 CCL7P80098 99 aa17.54■□□□□ 0.4
PRKCA-203ENST00000578063 ABHD18Q0P651 414 aa17.54■□□□□ 0.4
PRKCA-203ENST00000578063 GRM7Q14831 915 aa17.54■□□□□ 0.4
PRKCA-203ENST00000578063 SNCBQ16143 134 aa17.54■□□□□ 0.4
PRKCA-203ENST00000578063 AASDHQ4L235 1098 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms