RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 ALPPP05187 535 aa13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 SERPINA7P05543 415 aa13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 FAM58BPP0C7Q3 252 aa13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 GRK2P25098 689 aa13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 GSTM5P46439 218 aa13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 EFNA3P52797 238 aa13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 OR4D2P58180 307 aa13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 TRA2BP62995 288 aaKnown RBP13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 BTG2P78543 158 aa13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 CHAF1BQ13112 559 aa13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 SERTAD2Q14140 314 aa13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 PCOLCEQ15113 449 aa13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 TERF2Q15554 542 aa13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 EXT1Q16394 746 aa13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 SOWAHCQ53LP3 525 aaPredicted RBP13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 PLAG1Q6DJT9 500 aa13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 TRIM46Q7Z4K8 759 aa13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 CUZD1Q86UP6 607 aa13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 KBTBD2Q8IY47 623 aa13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 CLYBLQ8N0X4 340 aa13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 PPP1R14CQ8TAE6 165 aa13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 CHTF18Q8WVB6 975 aa13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 C8orf44Q96CB5 159 aa13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 SMAD5Q99717 465 aaKnown RBP13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 MECRQ9BV79 373 aa13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 LHPPQ9H008 270 aa13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 SIRT5Q9NXA8 310 aa13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 ASB4Q9Y574 426 aa13.05□□□□□ -0.32
SNORD3B-1-201ENST00000577988 PCSK5Q92824 1860 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 TMEM114B3SHH9 223 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 NPIPB8E9PQR5 432 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 SLC28A1O00337 649 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 EEDO75530 441 aaKnown RBP13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 DNAJB5O75953 348 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 SERPINE1P05121 402 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 KLK1P06870 262 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 ITGA3P26006 1051 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 PGDP52209 483 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 MAGOHP61326 146 aaKnown RBP13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 TNFRSF17Q02223 184 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 EEF1A2Q05639 463 aaKnown RBP13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 ACSM2AQ08AH3 577 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 TBL3Q12788 808 aaKnown RBP13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 SLC13A2Q13183 592 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 LY6DQ14210 128 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 LACTB2Q53H82 288 aaPredicted RBP13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 SPIN4Q56A73 249 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 SFT2D3Q587I9 215 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 ARL13AQ5H913 290 aaPredicted RBP13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 CCNYL2Q5T2Q4 361 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 VWA5B1Q5TIE3 1220 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 HHATQ5VTY9 493 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 ACSM2BQ68CK6 577 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 PAPD4Q6PIY7 484 aaKnown RBP13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 LANCL3Q6ZV70 420 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 PARP9Q8IXQ6 854 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 EFCAB3Q8N7B9 438 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 FDCSPQ8NFU4 85 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 FAM76AQ8TAV0 307 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 M1APQ8TC57 530 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 TSLPQ969D9 159 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 CCT7Q99832 543 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 SORBS1Q9BX66 1292 aaKnown RBP13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 MRPL1Q9BYD6 325 aaKnown RBP13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 RBCK1Q9BYM8 510 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 RPF2Q9H7B2 306 aaKnown RBP13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 ZNF160Q9HCG1 818 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 PFDN4Q9NQP4 134 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 NECTIN3Q9NQS3 549 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 FBXW2Q9UKT8 454 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 WBP11Q9Y2W2 641 aaKnown RBP13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 SPTA1P02549 2419 aa13.04□□□□□ -0.32
SNORD3B-1-201ENST00000577988 TMEM120BA0PK00 339 aa13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 OR2W5A6NFC9 320 aa13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 TMPRSS11DO60235 418 aa13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 PRR35P0CG20 571 aa13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 NEFHP12036 1026 aa13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 TPP2P29144 1249 aaPredicted RBP13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 HTR6P50406 440 aa13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 MAPK12P53778 367 aa13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 FOXA1P55317 472 aa13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 HNRNPH2P55795 449 aaKnown RBP13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 STX4Q12846 297 aa13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 MPP2Q14168 576 aa13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 IMPG1Q17R60 797 aa13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 TCHHL1Q5QJ38 904 aaPredicted RBP13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 AGAP7PQ5VUJ5 663 aa13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 GALNT18Q6P9A2 607 aa13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 COMMD6Q7Z4G1 85 aa13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 SHISA5Q8N114 240 aa13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 TMEM132CQ8N3T6 1108 aa13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 GOLGA6L1Q8N7Z2 621 aa13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 FAM47BQ8NA70 645 aa13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 THOC3Q96J01 351 aaKnown RBP13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 AGAP4Q96P64 663 aa13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 BBC3Q96PG8 261 aaPredicted RBP13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 KCNA7Q96RP8 456 aa13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 LMF1Q96S06 567 aa13.03□□□□□ -0.32
SNORD3B-1-201ENST00000577988 CSF3RQ99062 836 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms