RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 QSOX2Q6ZRP7 698 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 FJX1Q86VR8 437 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 GPSM1Q86YR5 675 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 TTLQ8NG68 377 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 RDH11Q8TC12 318 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 GAL3ST3Q96A11 431 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 ISL2Q96A47 359 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 RHBDF1Q96CC6 855 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 C7orf26Q96N11 449 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 LRRC37BQ96QE4 947 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 TAAR6Q96RI8 345 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 GPR22Q99680 433 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 SLC6A16Q9GZN6 736 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 KLHL31Q9H511 634 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 COPS7BQ9H9Q2 264 aaPredicted RBP9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 NPHS2Q9NP85 383 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 MMP25Q9NPA2 562 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 KLHL1Q9NR64 748 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 SNX15Q9NRS6 342 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 DNAJC11Q9NVH1 559 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 SH3BGRL2Q9UJC5 107 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 CAPN7Q9Y6W3 813 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 GTF3C1Q12789 2109 aa9.07□□□□□ -0.96
NPLOC4-216ENST00000574344 TRGV8A0A0C4DH27 118 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 SUPT3HB4E1H0 165 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 C4orf51C9J302 202 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 ERI3O43414 337 aaKnown RBP9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 CCNT2O60583 730 aaKnown RBP9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 DNAJB6O75190 326 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 SUPT3HO75486 399 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 UNC5CO95185 931 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 CLDN1O95832 211 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 BPGMP07738 259 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 CD46P15529 392 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 CD1DP15813 335 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 GRK2P25098 689 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 COL8A1P27658 744 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 EEF1DP29692 281 aaKnown RBP9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 TDGF1P3P51864 188 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 PRKAA2P54646 552 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 RAB10P61026 200 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 ATP6V0D1P61421 351 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 BTN3A2P78410 334 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 BTG2P78543 158 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 RBPJQ06330 500 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 TUBA3CQ13748 450 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 OR1C1Q15619 314 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 CHI3L2Q15782 390 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 TSNAXIP1Q2TAA8 658 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 XKR6Q5GH73 641 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 SULT1C3Q6IMI6 304 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 TRIM40Q6P9F5 258 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 TUBA3EQ6PEY2 450 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 TBC1D1Q86TI0 1168 aaPredicted RBP9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 CA13Q8N1Q1 262 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 HORMAD2Q8N7B1 307 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 TMEM178AQ8NBL3 297 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 FAM98AQ8NCA5 519 aaKnown RBP9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 DNAJB8Q8NHS0 232 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 ESAMQ96AP7 390 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 SIGLEC12Q96PQ1 595 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 RAB3IPQ96QF0 476 aaPredicted RBP9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 TMEM79Q9BSE2 394 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 CDCP1Q9H5V8 836 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 PRDM9Q9NQV7 894 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 GPRC5BQ9NZH0 403 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 SEC14L3Q9UDX4 400 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 SLC12A4Q9UP95 1085 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 MRPS33Q9Y291 106 aaKnown RBP9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 EML6Q6ZMW3 1958 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 TEX15Q9BXT5 2789 aa9.06□□□□□ -0.96
NPLOC4-216ENST00000574344 UNC79Q9P2D8 2635 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 CELSR2Q9HCU4 2923 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 A0A087X1B8 175 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 A0A096LPK6 155 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 A0A0G2JND7 137 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 A0A1B0GUH1 482 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 SAGE2PA6NJ88 616 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 FCHO1O14526 889 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 B3GALT2O43825 422 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 ZG16O60844 167 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 STK16O75716 305 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 MLYCDO95822 493 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 ALDOAP04075 364 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 GSTM2P28161 218 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 HNRNPH1P31943 449 aaKnown RBP9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 MAGEA12P43365 314 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 ARFIP2P53365 341 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 PLA2G16P53816 162 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 SF3A3Q12874 501 aaKnown RBP eCLIP9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 HYAL2Q12891 473 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 SLC13A2Q13183 592 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 STX3Q13277 289 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 OR4D1Q15615 310 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 HIST2H2ACQ16777 129 aaPredicted RBP9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 ZNF324BQ6AW86 544 aaPredicted RBP9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 ZNF787Q6DD87 383 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 HIST2H2AA3Q6FI13 130 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 CGB2Q6NT52 195 aa9.05□□□□□ -0.96
NPLOC4-216ENST00000574344 H3F3CQ6NXT2 135 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms