RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 CLCN5P51795 746 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 NXPH1P58417 271 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 SUMO2P61956 95 aaKnown RBP4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 ADAM8P78325 824 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 PAX5Q02548 391 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 MBTD1Q05BQ5 628 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 SULT2A1Q06520 285 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 SLC3A1Q07837 685 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 IL10RBQ08334 325 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 BST2Q10589 180 aaKnown RBP4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 ITGADQ13349 1161 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 TAF13Q15543 124 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 EXT1Q16394 746 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 MEP1AQ16819 746 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 RNF151Q2KHN1 245 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 C18orf21Q32NC0 220 aaPredicted RBP4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 PLK5Q496M5 336 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 SBK1Q52WX2 424 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 LGSNQ5TDP6 509 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 DENND2CQ68D51 928 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 HIST2H2BCQ6DN03 193 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 HIST2H2BDQ6DRA6 164 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 HIST2H2AA3Q6FI13 130 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 FBXO42Q6P3S6 717 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 FAM171BQ6P995 826 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 TUBA3EQ6PEY2 450 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 SHISA2Q6UWI4 295 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 C1orf229Q6ZS94 237 aaPredicted RBP4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 KLBQ86Z14 1044 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 CLEC10AQ8IUN9 316 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 EXD3Q8N9H8 876 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 SMYD1Q8NB12 490 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 SLC44A5Q8NCS7 719 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 TMEM104Q8NE00 496 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 TTLQ8NG68 377 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 OR4A15Q8NGL6 344 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 MARCH1Q8TCQ1 289 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 CACNG8Q8WXS5 425 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 ST8SIA1Q92185 356 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 SUSD6Q92537 303 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 ASB9Q96DX5 294 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 ZNF274Q96GC6 653 aaPredicted RBP4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 LIN37Q96GY3 246 aaPredicted RBP4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 SENP5Q96HI0 755 aaPredicted RBP4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 HPDLQ96IR7 371 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 LCORQ96JN0 433 aaPredicted RBP4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 PRMT6Q96LA8 375 aaPredicted RBP4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 GLT1D1Q96MS3 346 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 RBM24Q9BX46 236 aaKnown RBP4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 POTEKPQ9BYX7 375 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 TM6SF1Q9BZW5 370 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 SEMA4CQ9C0C4 833 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 DERL2Q9GZP9 239 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 OPN3Q9H1Y3 402 aaPredicted RBP4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 BCAS3Q9H6U6 928 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 ACTR5Q9H9F9 607 aaPredicted RBP4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 UBTD1Q9HAC8 227 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 RAB9BQ9NP90 201 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 CCNB1IP1Q9NPC3 277 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 POT1Q9NUX5 634 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 SMPD4Q9NXE4 827 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 MS4A12Q9NXJ0 267 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 P2RX2Q9UBL9 471 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 ZNF490Q9ULM2 529 aaPredicted RBP4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 RPH3ALQ9UNE2 315 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 FLVCR2Q9UPI3 526 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 RBMX2Q9Y388 322 aaKnown RBP4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 NFE2L3Q9Y4A8 694 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 ATG4BQ9Y4P1 393 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 PPIAL4AQ9Y536 164 aa4.71□□□□□ -1.66
TOPBP1-210ENST00000572787 A0A0U1RQF3 1178 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 DBX1A6NMT0 343 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 TMEM150CB9EJG8 249 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 GOLGA8KD6RF30 607 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 SLCO1B7G3V0H7 640 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 FBP2O00757 339 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 GPR171O14626 319 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 EIF3HO15372 352 aaKnown RBP eCLIP4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 KCNN4O15554 427 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 ZSCAN12O43309 604 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 NEBLO76041 1014 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 ANP32DO95626 131 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 MT-ND2P03891 347 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 APRTP07741 180 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 SP9P0CG40 484 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 CYP2C8P10632 490 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 CETPP11597 493 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 FGF5P12034 268 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 MLNP12872 115 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 ENO3P13929 434 aaPredicted RBP4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 GP9P14770 177 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 CPN1P15169 458 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 SRD5A1P18405 259 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 AMPD1P23109 780 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 NDUFS1P28331 727 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 ARRB2P32121 409 aa4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 ARRB1P49407 418 aaPredicted RBP4.7□□□□□ -1.66
TOPBP1-210ENST00000572787 CYP2J2P51589 502 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms