RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 AKAP7Q9P0M2 348 aaPredicted RBP5.13□□□□□ -1.59
SF3B3-214ENST00000572365 COX16Q9P0S2 106 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 PTGFRNQ9P2B2 879 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 C11orf21Q9P2W6 132 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 STOML2Q9UJZ1 356 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 NTNG1Q9Y2I2 539 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 AAR2Q9Y312 384 aaKnown RBP5.13□□□□□ -1.59
SF3B3-214ENST00000572365 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.13□□□□□ -1.59
SF3B3-214ENST00000572365 FADS3Q9Y5Q0 445 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 SNX10Q9Y5X0 201 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 RPS6KL1Q9Y6S9 549 aa5.13□□□□□ -1.59
SF3B3-214ENST00000572365 hCG_1807616A0A1W2PRN6 198 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 GOLGA6L4A6NEF3 574 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 STX6O43752 255 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 HNRNPCL1O60812 293 aaKnown RBP5.12□□□□□ -1.59
SF3B3-214ENST00000572365 CPNE6O95741 557 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 HLA-DRAP01903 254 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 SRCP12931 536 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 ETFAP13804 333 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 ADRB3P13945 408 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 CASP1P29466 404 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 GARSP41250 739 aaKnown RBP5.12□□□□□ -1.59
SF3B3-214ENST00000572365 RAD52P43351 418 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 CD151P48509 253 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 SRP54P61011 504 aaKnown RBP5.12□□□□□ -1.59
SF3B3-214ENST00000572365 PITX1P78337 314 aaPredicted RBP5.12□□□□□ -1.59
SF3B3-214ENST00000572365 AIMP2Q13155 320 aaKnown RBP5.12□□□□□ -1.59
SF3B3-214ENST00000572365 ELOCQ15369 112 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 GOLGA7BQ2TAP0 167 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 RILPL1Q5EBL4 403 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 SGO1Q5FBB7 561 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 ZRANB3Q5FWF4 1079 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 MTX3Q5HYI7 312 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 Q5PR19 223 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 ZNF626Q68DY1 528 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 NEK5Q6P3R8 708 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 FAM199XQ6PEV8 388 aaPredicted RBP5.12□□□□□ -1.59
SF3B3-214ENST00000572365 SPNS3Q6ZMD2 512 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 GKN2Q86XP6 184 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 LRRC8AQ8IWT6 810 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 CCAR2Q8N163 923 aaKnown RBP5.12□□□□□ -1.59
SF3B3-214ENST00000572365 RYBPQ8N488 228 aaPredicted RBP5.12□□□□□ -1.59
SF3B3-214ENST00000572365 NEK11Q8NG66 645 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 SLC35F5Q8WV83 523 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 LZICQ8WZA0 190 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 P3H4Q92791 437 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 TMEM159Q96B96 161 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 OTULINQ96BN8 352 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 CENPTQ96BT3 561 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 C1orf74Q96LT6 269 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 FEM1AQ9BSK4 669 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 CRACR2AQ9BSW2 395 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 SLC29A3Q9BZD2 475 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 MIS12Q9H081 205 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 TKTL2Q9H0I9 626 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 LRRC4Q9HBW1 653 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 MAGEE1Q9HCI5 957 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 BPIFA1Q9NP55 256 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 DECR2Q9NUI1 292 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 COPG2Q9UBF2 871 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 HEY2Q9UBP5 337 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 IL36AQ9UHA7 158 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 PYCARDQ9ULZ3 195 aa5.12□□□□□ -1.59
SF3B3-214ENST00000572365 GTF3C1Q12789 2109 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 INTS1Q8N201 2190 aaKnown RBP5.11□□□□□ -1.59
SF3B3-214ENST00000572365 FAM237AA0A1B0GTK4 181 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 FAM170AA1A519 330 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 FAM90A8PA6NJQ4 464 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 C19orf84I3L1E1 186 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 LIN7AO14910 233 aaPredicted RBP5.11□□□□□ -1.59
SF3B3-214ENST00000572365 TSPAN9O75954 239 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 TNFP01375 233 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 ALPIP09923 528 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 FAM90A13PP0C7W8 464 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 FAM90A24PP0C7X0 464 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 TFPIP10646 304 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 SKILP12757 684 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 GAP43P17677 238 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 AK4P27144 223 aaPredicted RBP5.11□□□□□ -1.59
SF3B3-214ENST00000572365 ZNF75DP51815 510 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 ART1P52961 327 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 LIMK2P53671 638 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 PMS2P54278 862 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 F2RL1P55085 397 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 SELENOVP59797 346 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 FOXM1Q08050 763 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 EPS8Q12929 822 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 IRF4Q15306 451 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 SRSF7Q16629 238 aaKnown RBP eCLIP5.11□□□□□ -1.59
SF3B3-214ENST00000572365 SGSM1Q2NKQ1 1148 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 C14orf28Q4W4Y0 310 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 RAB41Q5JT25 222 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 PLEKHS1Q5SXH7 462 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 MPP7Q5T2T1 576 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 SYPL2Q5VXT5 272 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 SPECC1LQ69YQ0 1117 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 PM20D1Q6GTS8 502 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 SHC4Q6S5L8 630 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 LCTLQ6UWM7 567 aa5.11□□□□□ -1.59
SF3B3-214ENST00000572365 SLC16A12Q6ZSM3 486 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms