RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 C1QTNF3Q9BXJ4 246 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 ROGDIQ9GZN7 287 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 PNO1Q9NRX1 252 aaKnown RBP13.62□□□□□ -0.23
LITAF-208ENST00000571627 ANKRD10Q9NXR5 420 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 GRID1Q9ULK0 1009 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 MMACHCQ9Y4U1 282 aa13.62□□□□□ -0.23
LITAF-208ENST00000571627 TRAV17A0A0B4J275 112 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 OR5H15A6NDH6 313 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 COPEO14579 308 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 MYO1DO94832 1006 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 RPS17P08708 135 aaKnown RBP13.61□□□□□ -0.23
LITAF-208ENST00000571627 HIST1H1TP22492 207 aaPredicted RBP13.61□□□□□ -0.23
LITAF-208ENST00000571627 NEK2P51955 445 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 RAP1GDS1P52306 607 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 HSD17B7P56937 341 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 RPS13P62277 151 aaKnown RBP13.61□□□□□ -0.23
LITAF-208ENST00000571627 HERVK_113P63132 956 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 SRSF11Q05519 484 aaKnown RBP13.61□□□□□ -0.23
LITAF-208ENST00000571627 AP5B1Q2VPB7 878 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 CCDC153Q494R4 210 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 C10orf62Q5T681 223 aaPredicted RBP13.61□□□□□ -0.23
LITAF-208ENST00000571627 DEPDC1Q5TB30 811 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 FAM26EQ8N5C1 309 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 NFAM1Q8NET5 270 aaPredicted RBP13.61□□□□□ -0.23
LITAF-208ENST00000571627 OR2W6PQ8NHA6 318 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 ELP5Q8TE02 316 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 ADAMTS18Q8TE60 1221 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 ZNF483Q8TF39 744 aaPredicted RBP13.61□□□□□ -0.23
LITAF-208ENST00000571627 CCDC126Q96EE4 140 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 ZNF354BQ96LW1 612 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 BARD1Q99728 777 aaKnown RBP13.61□□□□□ -0.23
LITAF-208ENST00000571627 CENPKQ9BS16 269 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 TBCDQ9BTW9 1192 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 TMEM109Q9BVC6 243 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 ERVK-6Q9BXR3 956 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 RNF32Q9H0A6 362 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 ZBTB26Q9HCK0 441 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 KCMF1Q9P0J7 381 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 LGALS13Q9UHV8 139 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 FBXW2Q9UKT8 454 aa13.61□□□□□ -0.23
LITAF-208ENST00000571627 MRPS33Q9Y291 106 aaKnown RBP13.61□□□□□ -0.23
LITAF-208ENST00000571627 FOXO6A8MYZ6 492 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 CLDN4O14493 209 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 PLPP1O14494 284 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 DLX3O60479 287 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 CBX6O95503 412 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 ETHE1O95571 254 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 OTCP00480 354 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 KRT4P19013 534 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 TSPAN8P19075 237 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 IMPDH1P20839 514 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 PRKAA2P54646 552 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 TAS2R50P59544 299 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 NAA20P61599 178 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 ID2Q02363 134 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 SLC18A2Q05940 514 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 TRAF3Q13114 568 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 TUBA3CQ13748 450 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 ZRSR2Q15696 482 aaKnown RBP13.6□□□□□ -0.23
LITAF-208ENST00000571627 MEP1AQ16819 746 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 OR4C11Q6IEV9 310 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 TUBA3EQ6PEY2 450 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 FAM180AQ6UWF9 173 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 MILR1Q7Z6M3 343 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 ZNF595Q8IYB9 648 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 SLC5A8Q8N695 610 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 PRR7Q8TB68 274 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 WDR20Q8TBZ3 569 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 MTFMTQ96DP5 389 aaKnown RBP13.6□□□□□ -0.23
LITAF-208ENST00000571627 SIGLEC12Q96PQ1 595 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 TAAR6Q96RI8 345 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 CDCP1Q9H5V8 836 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 LYRM4Q9HD34 91 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 SEMA4BQ9NPR2 832 aaPredicted RBP13.6□□□□□ -0.23
LITAF-208ENST00000571627 AGPAT4Q9NRZ5 378 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 PSD3Q9NYI0 1048 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 STK38LQ9Y2H1 464 aa13.6□□□□□ -0.23
LITAF-208ENST00000571627 SPTBN1Q01082 2364 aaKnown RBP13.59□□□□□ -0.23
LITAF-208ENST00000571627 TRBV11-1A0A0K0K1C0 115 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 A0A1B0GTL3 188 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 ANKUB1A6NFN9 424 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 GABRR3A8MPY1 467 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 FOXE1O00358 373 aaPredicted RBP13.59□□□□□ -0.23
LITAF-208ENST00000571627 PPP6CO00743 305 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 PRAMEF2O60811 474 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 LDB3O75112 727 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 SEMA7AO75326 666 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 PRKRAO75569 313 aaKnown RBP13.59□□□□□ -0.23
LITAF-208ENST00000571627 SCELO95171 688 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 MYL2P10916 166 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 PTX3P26022 381 aaPredicted RBP13.59□□□□□ -0.23
LITAF-208ENST00000571627 CD96P40200 585 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 ARFIP1P53367 373 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 PMP22Q01453 160 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 CLCQ05315 142 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 SLAMF1Q13291 335 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 RCN2Q14257 317 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 GGTA1PQ4G0N0 100 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 ZNF678Q5SXM1 525 aa13.59□□□□□ -0.23
LITAF-208ENST00000571627 RPUSD3Q6P087 351 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms