RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 TYK2P29597 1187 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 RYKP34925 604 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 GRIA1P42261 906 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 SLC1A3P43003 542 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 SLCO1A2P46721 670 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 CSNK1DP48730 415 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 CD97P48960 835 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 SERPINH1P50454 418 aaKnown RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 HNRNPFP52597 415 aaKnown RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 SOX8P57073 446 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 UFM1P61960 85 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 CSNK2A1P68400 391 aaPredicted RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 SH3BP2P78314 561 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 CAV1Q03135 178 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 CSTF1Q05048 431 aaKnown RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 CDK18Q07002 472 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 MGAT2Q10469 447 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 POU4F2Q12837 409 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 SLC29A2Q14542 456 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 PDK2Q15119 407 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 MAPK11Q15759 364 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 PPP1R3AQ16821 1122 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 PNLIPRP3Q17RR3 467 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 DPY19L1Q2PZI1 675 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 LSM12Q3MHD2 195 aaKnown RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 SLC25A52Q3SY17 297 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 MGAT5BQ3V5L5 792 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 YIF1BQ5BJH7 314 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 FNBP1LQ5T0N5 605 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 PRAMEF5Q5TYX0 476 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 CROCCQ5TZA2 2017 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 PDE4DIPQ5VU43 2346 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 PRAMEF9Q5VWM5 478 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 PRAMEF6Q5VXH4 476 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 BSPRYQ5W0U4 402 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 GRAMD4Q6IC98 578 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 KIAA0930Q6ICG6 404 aaPredicted RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 PYHIN1Q6K0P9 492 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 C3orf33Q6P1S2 294 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 PRMT9Q6P2P2 845 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 FBXO46Q6PJ61 603 aaPredicted RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 BRAT1Q6PJG6 821 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 TMIGD1Q6UXZ0 262 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 ZNF534Q76KX8 674 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 EIF3MQ7L2H7 374 aaKnown RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 ARCQ7LC44 396 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 STRADAQ7RTN6 431 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 TMPRSS7Q7RTY8 843 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 PAGE2Q7Z2X7 111 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 SPRED2Q7Z698 418 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 LUZP2Q86TE4 346 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 CYP4Z1Q86W10 505 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 PAQR7Q86WK9 346 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 PROSER1Q86XN7 944 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 CLVS1Q8IUQ0 354 aaPredicted RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 IGDCC3Q8IVU1 814 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 SIAH3Q8IW03 269 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 THEM5Q8N1Q8 247 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 DCBLD1Q8N8Z6 715 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 CSNK2A3Q8NEV1 391 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 TMEM185AQ8NFB2 350 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 TSPAN14Q8NG11 270 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 OR2L3Q8NG85 312 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 OR4K14Q8NGD5 310 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 OR13F1Q8NGS4 319 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 ZNF473Q8WTR7 871 aaKnown RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 NSMCE1Q8WV22 266 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 NKD2Q969F2 451 aaPredicted RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 WBP2Q969T9 261 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 ARSGQ96EG1 525 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 MYEOVQ96EZ4 313 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 THOC3Q96J01 351 aaKnown RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 C16orf92Q96LL3 132 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 C5orf34Q96MH7 638 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 CSPG4P5Q96PW8 444 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 BTBD9Q96Q07 612 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 TRIB1Q96RU8 372 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 INSM2Q96T92 566 aaPredicted RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 CD180Q99467 661 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 SEPT5Q99719 369 aaPredicted RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 VRK1Q99986 396 aaPredicted RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 SRSF8Q9BRL6 282 aaKnown RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 TMEM175Q9BSA9 504 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 ALKBH7Q9BT30 221 aaPredicted RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 FICDQ9BVA6 458 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 PAPOLGQ9BWT3 736 aaKnown RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 SGPP1Q9BX95 441 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 FTHL17Q9BXU8 183 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 SEMA4CQ9C0C4 833 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 IL22Q9GZX6 179 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 SLC22A4Q9H015 551 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 TKTL2Q9H0I9 626 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 S1PR5Q9H228 398 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 SLC6A15Q9H2J7 730 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 OR51B5Q9H339 312 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 HRH4Q9H3N8 390 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 NELFAQ9H3P2 528 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 SMOC2Q9H3U7 446 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 C11orf49Q9H6J7 331 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 TMEM185BQ9H7F4 350 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms