RNA–Protein interactions for RNA: ENST00000570845.5

ATP2A3-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, human

TSL 1 (best)

Gene ATP2A3, Length 604 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2A3-208	ENST00000570845	TMEM205	Q6UW68	189 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	KIRREL2	Q6UWL6	708 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	QSOX2	Q6ZRP7	698 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	LANCL3	Q6ZV70	420 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	TRIM46	Q7Z4K8	759 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	GPR180	Q86V85	440 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	TRIM42	Q8IWZ5	723 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	HOMEZ	Q8IX15	550 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	DDIAS	Q8IXT1	998 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	ZNF781	Q8N8C0	355 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	TMEM52	Q8NDY8	209 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	PLPP5	Q8NEB5	264 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	OR11G2	Q8NGC1	345 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	RAB3IL1	Q8TBN0	382 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	CHTF18	Q8WVB6	975 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	TWIST2	Q8WVJ9	160 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	EXTL1	Q92935	676 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	TSLP	Q969D9	159 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	NACC2	Q96BF6	587 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	VPS50	Q96JG6	964 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	PTCHD1	Q96NR3	888 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	SORT1	Q99523	831 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	C20orf27	Q9GZN8	174 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	TUBB1	Q9H4B7	451 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	PRDM9	Q9NQV7	894 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	PRTFDC1	Q9NRG1	225 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	MS4A12	Q9NXJ0	267 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	FBXL4	Q9UKA2	621 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	ADAM29	Q9UKF5	820 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	LHX6	Q9UPM6	363 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	RAP2C	Q9Y3L5	183 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	ATG4B	Q9Y4P1	393 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	KCNMB2	Q9Y691	235 aa		10.88	□□□□□ -0.67
ATP2A3-208	ENST00000570845	FAM208B	Q5VWN6	2430 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	SLC28A1	O00337	649 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	CLDN4	O14493	209 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	PIP5K1B	O14986	540 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	RGS14	O43566	566 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	PCDH7	O60245	1069 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	SKAP2	O75563	359 aa	Predicted RBP	10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	LINC00032	P0C843	101 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	TLX1	P31314	330 aa	Predicted RBP	10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	BUD31	P41223	144 aa	Predicted RBP	10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	MAPK12	P53778	367 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	RRAD	P55042	308 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	HSD17B7	P56937	341 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	RHD	Q02161	417 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	TNFRSF17	Q02223	184 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	SLC13A2	Q13183	592 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	NSDHL	Q15738	373 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	UGT3A2	Q3SY77	523 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	ATG16L1	Q676U5	607 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	C18orf63	Q68DL7	685 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	MRM1	Q6IN84	353 aa	Known RBP	10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	RNF165	Q6ZSG1	346 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	MED25	Q71SY5	747 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	ANKRD37	Q7Z713	158 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	CLNK	Q7Z7G1	428 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	SCUBE1	Q8IWY4	988 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	ZNF595	Q8IYB9	648 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	TMEM102	Q8N9M5	508 aa	Predicted RBP	10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	APOBEC4	Q8WW27	367 aa	Known RBP	10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	DYDC1	Q8WWB3	177 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	APIP	Q96GX9	242 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	FER1L6-AS2	Q96M78	137 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	ARHGAP9	Q9BRR9	750 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	ILKAP	Q9H0C8	392 aa	Predicted RBP	10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	MANSC1	Q9H8J5	431 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	NECTIN3	Q9NQS3	549 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	C19orf25	Q9UFG5	118 aa	Predicted RBP	10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	MMACHC	Q9Y4U1	282 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	ASB4	Q9Y574	426 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	ATRX	P46100	2492 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	COL6A6	A6NMZ7	2263 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	FREM3	P0C091	2139 aa		10.87	□□□□□ -0.67
ATP2A3-208	ENST00000570845	LOC102723996	A0A087X1L8	192 aa		10.86	□□□□□ -0.67
ATP2A3-208	ENST00000570845	IGHV1-45	A0A0A0MS14	117 aa		10.86	□□□□□ -0.67
ATP2A3-208	ENST00000570845	NSG1	A0A0A6YYJ2	146 aa		10.86	□□□□□ -0.67
ATP2A3-208	ENST00000570845	IGHV3-20	A0A0C4DH32	117 aa		10.86	□□□□□ -0.67
ATP2A3-208	ENST00000570845	GNG14	A0A1W2PPG7	69 aa		10.86	□□□□□ -0.67
ATP2A3-208	ENST00000570845		A0A1W2PR48	441 aa		10.86	□□□□□ -0.67
ATP2A3-208	ENST00000570845	BLACE	A4D250	179 aa		10.86	□□□□□ -0.67
ATP2A3-208	ENST00000570845	MASP2	O00187	686 aa		10.86	□□□□□ -0.67
ATP2A3-208	ENST00000570845	PROM1	O43490	865 aa		10.86	□□□□□ -0.67
ATP2A3-208	ENST00000570845	LDB3	O75112	727 aa		10.86	□□□□□ -0.67
ATP2A3-208	ENST00000570845	SEC22B	O75396	215 aa		10.86	□□□□□ -0.67
ATP2A3-208	ENST00000570845	PRKRA	O75569	313 aa	Known RBP	10.86	□□□□□ -0.67
ATP2A3-208	ENST00000570845	RSL1D1	O76021	490 aa	Known RBP	10.86	□□□□□ -0.67
ATP2A3-208	ENST00000570845	AIFM1	O95831	613 aa		10.86	□□□□□ -0.67
ATP2A3-208	ENST00000570845	HP	P00738	406 aa		10.86	□□□□□ -0.67
ATP2A3-208	ENST00000570845	NR2F6	P10588	404 aa		10.86	□□□□□ -0.67
ATP2A3-208	ENST00000570845	COX6A1	P12074	109 aa		10.86	□□□□□ -0.67
ATP2A3-208	ENST00000570845	NR1D1	P20393	614 aa		10.86	□□□□□ -0.67
ATP2A3-208	ENST00000570845	TIA1	P31483	386 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
ATP2A3-208	ENST00000570845	RPL14	P50914	215 aa	Known RBP	10.86	□□□□□ -0.67
ATP2A3-208	ENST00000570845	OR4D2	P58180	307 aa		10.86	□□□□□ -0.67
ATP2A3-208	ENST00000570845	RAE1	P78406	368 aa	Known RBP	10.86	□□□□□ -0.67
ATP2A3-208	ENST00000570845	NR6A1	Q15406	480 aa		10.86	□□□□□ -0.67
ATP2A3-208	ENST00000570845	SFT2D3	Q587I9	215 aa		10.86	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms