RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 TMPRSS11DO60235 418 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 EEDO75530 441 aaKnown RBP9□□□□□ -0.97
HCCAT5-201ENST00000569990 SEC24DO94855 1032 aaPredicted RBP9□□□□□ -0.97
HCCAT5-201ENST00000569990 MYZAPP0CAP1 466 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 HSD3B1P14060 373 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 ITGA3P26006 1051 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 HSD3B2P26439 372 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 PGDP52209 483 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 FOXA1P55317 472 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 HNRNPH2P55795 449 aaKnown RBP9□□□□□ -0.97
HCCAT5-201ENST00000569990 HSD17B7P56937 341 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 OR4D2P58180 307 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 ZNF33BQ06732 778 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 TBL3Q12788 808 aaKnown RBP9□□□□□ -0.97
HCCAT5-201ENST00000569990 ASPHQ12797 758 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 NFATC3Q12968 1075 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 CSTF3Q12996 717 aaKnown RBP9□□□□□ -0.97
HCCAT5-201ENST00000569990 RAPSNQ13702 412 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 SFT2D3Q587I9 215 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 VWA5B1Q5TIE3 1220 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 MRM1Q6IN84 353 aaKnown RBP9□□□□□ -0.97
HCCAT5-201ENST00000569990 NUDT13Q86X67 352 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 SCUBE1Q8IWY4 988 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 PARP9Q8IXQ6 854 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 METTL4Q8N3J2 472 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 ZNF843Q8N446 348 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 AMER2Q8N7J2 671 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 PKNOX2Q96KN3 472 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 KCNA7Q96RP8 456 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 SMAD5Q99717 465 aaKnown RBP9□□□□□ -0.97
HCCAT5-201ENST00000569990 MAPKAP1Q9BPZ7 522 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 TRMOQ9BU70 441 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 TUBB6Q9BUF5 446 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 MRPL1Q9BYD6 325 aaKnown RBP9□□□□□ -0.97
HCCAT5-201ENST00000569990 LHPPQ9H008 270 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 ZNF552Q9H707 407 aaPredicted RBP9□□□□□ -0.97
HCCAT5-201ENST00000569990 TNFRSF12AQ9NP84 129 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 ZNF71Q9NQZ8 489 aaPredicted RBP9□□□□□ -0.97
HCCAT5-201ENST00000569990 PRTFDC1Q9NRG1 225 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 FBXW2Q9UKT8 454 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 G3BP2Q9UN86 482 aaKnown RBP9□□□□□ -0.97
HCCAT5-201ENST00000569990 SLC12A4Q9UP95 1085 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 MRPS33Q9Y291 106 aaKnown RBP9□□□□□ -0.97
HCCAT5-201ENST00000569990 TIMM22Q9Y584 194 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 PCDHGB7Q9Y5F8 929 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 CLDN16Q9Y5I7 305 aa9□□□□□ -0.97
HCCAT5-201ENST00000569990 TM9SF1O15321 606 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 NPHS1O60500 1241 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 KLHL41O60662 606 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 CTNSO60931 367 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 ULK1O75385 1050 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 GBAP04062 536 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 SERPINA7P05543 415 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 BPGMP07738 259 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 CELA2AP08217 269 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 FAM58BPP0C7Q3 252 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 PRR35P0CG20 571 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 ICAM2P13598 275 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 CHN1P15882 459 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 H2AFXP16104 143 aaPredicted RBP8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 CPN2P22792 545 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 TNFRSF17Q02223 184 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 GALNT1Q10472 559 aaPredicted RBP8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 SLC13A2Q13183 592 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 MPP2Q14168 576 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 PLAG1Q6DJT9 500 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 PAPD4Q6PIY7 484 aaKnown RBP8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 CYP20A1Q6UW02 462 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 RIPOR1Q6ZS17 1223 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 ASB18Q6ZVZ8 466 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 COMMD6Q7Z4G1 85 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 GPR180Q86V85 440 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 KBTBD2Q8IY47 623 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 GBP7Q8N8V2 638 aaPredicted RBP8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 PSMF1Q92530 271 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 THOC3Q96J01 351 aaKnown RBP8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 CNDP1Q96KN2 507 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 LPAR4Q99677 370 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 ACPTQ9BZG2 426 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 SHCBP1LQ9BZQ2 653 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 STMN4Q9H169 189 aaPredicted RBP8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 NMRK1Q9NWW6 199 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 LYARQ9NX58 379 aaKnown RBP8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 MS4A12Q9NXJ0 267 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 AHSPQ9NZD4 102 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 VPS29Q9UBQ0 182 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 PHF11Q9UIL8 331 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 ADAM29Q9UKF5 820 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 ZNF451Q9Y4E5 1061 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 ATG4BQ9Y4P1 393 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 ASB4Q9Y574 426 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 SPACA6W5XKT8 324 aa8.99□□□□□ -0.97
HCCAT5-201ENST00000569990 BSNQ9UPA5 3926 aa8.98□□□□□ -0.97
HCCAT5-201ENST00000569990 SPTA1P02549 2419 aa8.98□□□□□ -0.97
HCCAT5-201ENST00000569990 A0A1W2PR48 441 aa8.98□□□□□ -0.97
HCCAT5-201ENST00000569990 SERTM1A2A2V5 107 aa8.98□□□□□ -0.97
HCCAT5-201ENST00000569990 BLACEA4D250 179 aa8.98□□□□□ -0.97
HCCAT5-201ENST00000569990 SYNDIG1LA6NDD5 238 aa8.98□□□□□ -0.97
HCCAT5-201ENST00000569990 SAGE2PA6NJ88 616 aa8.98□□□□□ -0.97
HCCAT5-201ENST00000569990 PROM1O43490 865 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms