RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 RBBP6Q7Z6E9 1792 aaKnown RBP3.43□□□□□ -1.86
UBR1-211ENST00000569971 A0A0A6YYC8 382 aaPredicted RBP3.43□□□□□ -1.86
UBR1-211ENST00000569971 A0A1W2PRB8 838 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 MAGEA13PA6NCF6 341 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 CCDC169A6NNP5 214 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 MIF4GDA9UHW6 222 aaKnown RBP3.43□□□□□ -1.86
UBR1-211ENST00000569971 I3L1I5 382 aaPredicted RBP3.43□□□□□ -1.86
UBR1-211ENST00000569971 PLOD2O00469 737 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 CTDSPLO15194 276 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 FLRT2O43155 660 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 SLC28A2O43868 658 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 RPS6KA5O75582 802 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 STAM2O75886 525 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 OLFM2O95897 454 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 GH1P01241 217 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 TRIM49P0CI25 452 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 TRIM49CP0CI26 452 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 IRF2P14316 349 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 DPEP1P16444 411 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 ZNF23P17027 643 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 YWHABP31946 246 aaKnown RBP3.43□□□□□ -1.86
UBR1-211ENST00000569971 GTF2H1P32780 548 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 CTNNB1P35222 781 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 MNDAP41218 407 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 KHKP50053 298 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 VAMP7P51809 220 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 FUT6P51993 359 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 HADHBP55084 474 aaKnown RBP3.43□□□□□ -1.86
UBR1-211ENST00000569971 CLDN15P56746 228 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 KIAA1024LP59773 190 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 SEC61A1P61619 476 aaKnown RBP3.43□□□□□ -1.86
UBR1-211ENST00000569971 RPL24P83731 157 aaKnown RBP3.43□□□□□ -1.86
UBR1-211ENST00000569971 GTF2BQ00403 316 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 FOLH1Q04609 750 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 MBTD1Q05BQ5 628 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 CBX3Q13185 183 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 MFAP5Q13361 173 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 PTGISQ16647 500 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 IQCCQ4KMZ1 466 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 KLHL22Q53GT1 634 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 SPDYCQ5MJ68 293 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 SPOUT1Q5T280 376 aaKnown RBP3.43□□□□□ -1.86
UBR1-211ENST00000569971 CYP4A22Q5TCH4 519 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 ARHGEF16Q5VV41 709 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 CORO6Q6QEF8 472 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 BTNL8Q6UX41 500 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 PIGWQ7Z7B1 504 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 GPALPP1Q8IXQ4 340 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 MREGQ8N565 214 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 ARFGAP2Q8N6H7 521 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 IQCF1Q8N6M8 205 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 UBL4BQ8N7F7 174 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 OR11H4Q8NGC9 324 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 KIFAP3Q92845 792 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 NEUROG1Q92886 237 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 LRRC45Q96CN5 670 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 BICD1Q96G01 975 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 ZBED3Q96IU2 234 aaPredicted RBP3.43□□□□□ -1.86
UBR1-211ENST00000569971 THOC3Q96J01 351 aaKnown RBP3.43□□□□□ -1.86
UBR1-211ENST00000569971 ADGRG7Q96K78 797 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 FAM71F1Q96KD3 344 aaPredicted RBP3.43□□□□□ -1.86
UBR1-211ENST00000569971 GDAP1L1Q96MZ0 367 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 RUNDC3BQ96NL0 473 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 INPP4AQ96PE3 977 aaPredicted RBP3.43□□□□□ -1.86
UBR1-211ENST00000569971 AGPAT1Q99943 283 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 RAB17Q9H0T7 212 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 SRD5A3Q9H8P0 318 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 Q9H8V8 135 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 SLC38A10Q9HBR0 1119 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 RAVER2Q9HCJ3 691 aaKnown RBP3.43□□□□□ -1.86
UBR1-211ENST00000569971 POLD4Q9HCU8 107 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 A4GALTQ9NPC4 353 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 UBE2TQ9NPD8 197 aaPredicted RBP3.43□□□□□ -1.86
UBR1-211ENST00000569971 GDF3Q9NR23 364 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 GSN-AS1Q9NRJ2 163 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 FAM114A2Q9NRY5 505 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 GKN1Q9NS71 199 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 TMEM161AQ9NX61 479 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 WWOXQ9NZC7 414 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 ZHX2Q9Y6X8 837 aa3.43□□□□□ -1.86
UBR1-211ENST00000569971 TRAV24A0A0B4J272 114 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 C19orf81C9J6K1 198 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 SLC16A4O15374 487 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 RAD51CO43502 376 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 RNASEH1O60930 286 aaKnown RBP3.42□□□□□ -1.86
UBR1-211ENST00000569971 CRCPO75575 148 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 PNPP00491 289 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 GZMAP12544 262 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 CCKBRP32239 447 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 SERPINB6P35237 376 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 HSPA9P38646 679 aaKnown RBP3.42□□□□□ -1.86
UBR1-211ENST00000569971 FRKP42685 505 aaPredicted RBP3.42□□□□□ -1.86
UBR1-211ENST00000569971 NKX2-1P43699 371 aaPredicted RBP3.42□□□□□ -1.86
UBR1-211ENST00000569971 CDX1P47902 265 aaPredicted RBP3.42□□□□□ -1.86
UBR1-211ENST00000569971 GCLMP48507 274 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 PEX3P56589 373 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 LTBQ06643 244 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 ENPEPQ07075 957 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 RASGEF1BQ0VAM2 473 aa3.42□□□□□ -1.86
UBR1-211ENST00000569971 ILF2Q12905 390 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms