RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 CSNK2BP67870 215 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 OTUD4Q01804 1114 aaKnown RBP5.88□□□□□ -1.47
LINC00556-201ENST00000569603 OCRLQ01968 901 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 BOP1Q14137 746 aaKnown RBP5.88□□□□□ -1.47
LINC00556-201ENST00000569603 ZIC1Q15915 447 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 NADK2Q4G0N4 442 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 CRB2Q5IJ48 1285 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 ANKRD20A2Q5SQ80 823 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 ANKRD20A1Q5TYW2 823 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 ANKRD20A3Q5VUR7 823 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 AADACL2Q6P093 401 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 PAPD4Q6PIY7 484 aaKnown RBP5.88□□□□□ -1.47
LINC00556-201ENST00000569603 PET117Q6UWS5 81 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 CYP2R1Q6VVX0 501 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 DET1Q7L5Y6 550 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 PID1Q7Z2X4 250 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 SZRD1Q7Z422 152 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 SNX20Q7Z614 316 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 STK32CQ86UX6 486 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 OOSP2Q86WS3 158 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 ZBTB2Q8N680 514 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 RBMXL3Q8N7X1 1067 aaKnown RBP5.88□□□□□ -1.47
LINC00556-201ENST00000569603 GLIS1Q8NBF1 620 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 ACVR1CQ8NER5 493 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 KIF18AQ8NI77 898 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 HM13Q8TCT9 377 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 SLC26A7Q8TE54 656 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 SEC14L1Q92503 715 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 SDCCAG3Q96C92 435 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 HAUS1Q96CS2 278 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 FAM120BQ96EK7 910 aaKnown RBP5.88□□□□□ -1.47
LINC00556-201ENST00000569603 MVB12AQ96EY5 273 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 C11orf24Q96F05 449 aaPredicted RBP5.88□□□□□ -1.47
LINC00556-201ENST00000569603 C12orf66Q96MD2 445 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 SPATA13Q96N96 652 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 TRAPPC9Q96Q05 1148 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 SH3GL2Q99962 352 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 APOL2Q9BQE5 337 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 HEMGNQ9BXL5 484 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 TLR10Q9BXR5 811 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 NLNQ9BYT8 704 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 ING2Q9H160 280 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 ASB8Q9H765 288 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 COG4Q9H9E3 785 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 GP6Q9HCN6 339 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 OBP2BQ9NPH6 170 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 SLC35D1Q9NTN3 355 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 FKBP14Q9NWM8 211 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 NINJ2Q9NZG7 142 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 RSPH14Q9UHP6 348 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 SRPK3Q9UPE1 567 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 KLHL20Q9Y2M5 609 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 PKP3Q9Y446 797 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 PCDHA13Q9Y5I0 950 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 ITPR3Q14573 2671 aa5.88□□□□□ -1.47
LINC00556-201ENST00000569603 TCRBV16S1A1N1A0A5B0 115 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 GRID2IPA4D2P6 1211 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 SH3D21A4FU49 640 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 CCDC151A5D8V7 595 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 BTNL10A8MVZ5 291 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 MATN2O00339 956 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 BTN3A1O00481 513 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 NIPSNAP2O75323 286 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 H2AFYO75367 372 aaKnown RBP5.87□□□□□ -1.47
LINC00556-201ENST00000569603 ONECUT2O95948 504 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 KRT14P02533 472 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 SLC35G4P0C7Q5 338 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 GAAP10253 952 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 ATP1B2P14415 290 aaPredicted RBP5.87□□□□□ -1.47
LINC00556-201ENST00000569603 PVRP15151 417 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 POLR2CP19387 275 aaPredicted RBP5.87□□□□□ -1.47
LINC00556-201ENST00000569603 MSH3P20585 1137 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 GALP22466 123 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 ACRV1P26436 265 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 NDUFS1P28331 727 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 PEBP1P30086 187 aaKnown RBP5.87□□□□□ -1.47
LINC00556-201ENST00000569603 SERPINF1P36955 418 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 MAGEA1P43355 309 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 LUMP51884 338 aaPredicted RBP5.87□□□□□ -1.47
LINC00556-201ENST00000569603 GEMP55040 296 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 GSDMDP57764 484 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 PPP2R2AP63151 447 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 EPS8Q12929 822 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 CUL1Q13616 776 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 NCF4Q15080 339 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 GPR33Q49SQ1 333 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 PRR30Q53SZ7 412 aaPredicted RBP5.87□□□□□ -1.47
LINC00556-201ENST00000569603 CYB5D1Q6P9G0 228 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 CDHR3Q6ZTQ4 885 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 RHOUQ7L0Q8 258 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 MAMDC2Q7Z304 686 aaPredicted RBP5.87□□□□□ -1.47
LINC00556-201ENST00000569603 GRAMD2AQ8IUY3 354 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 DENND6AQ8IWF6 608 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 CLDN19Q8N6F1 224 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 ENDOVQ8N8Q3 282 aaKnown RBP5.87□□□□□ -1.47
LINC00556-201ENST00000569603 OR4E2Q8NGC2 313 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 OR52E1Q8NGJ3 308 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 SLC35B2Q8TB61 432 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 BCAS4Q8TDM0 211 aa5.87□□□□□ -1.47
LINC00556-201ENST00000569603 RBM41Q96IZ5 413 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms