RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 SNIP1Q8TAD8 396 aaKnown RBP22.13■■□□□ 1.13
RAB40C-212ENST00000569575 STT3BQ8TCJ2 826 aa22.13■■□□□ 1.13
RAB40C-212ENST00000569575 MAPKAP1Q9BPZ7 522 aa22.13■■□□□ 1.13
RAB40C-212ENST00000569575 YIPF2Q9BWQ6 316 aa22.13■■□□□ 1.13
RAB40C-212ENST00000569575 TMEM120AQ9BXJ8 343 aa22.13■■□□□ 1.13
RAB40C-212ENST00000569575 DPH1Q9BZG8 443 aa22.13■■□□□ 1.13
RAB40C-212ENST00000569575 BRINP2Q9C0B6 783 aa22.13■■□□□ 1.13
RAB40C-212ENST00000569575 RABEP2Q9H5N1 569 aa22.13■■□□□ 1.13
RAB40C-212ENST00000569575 TAS2R7Q9NYW3 318 aa22.13■■□□□ 1.13
RAB40C-212ENST00000569575 POLR3HQ9Y535 204 aaPredicted RBP22.13■■□□□ 1.13
RAB40C-212ENST00000569575 AHCTF1Q8WYP5 2266 aa22.13■■□□□ 1.13
RAB40C-212ENST00000569575 CACNA1AO00555 2505 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 ZNF860A6NHJ4 632 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 SNX3O60493 162 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 TBX19O60806 448 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 ZGLP1P0C6A0 271 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 NR2F6P10588 404 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 SDC1P18827 310 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 TCN2P20062 427 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 ATP4BP51164 291 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 CLDN8P56748 225 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 TAS2R50P59544 299 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 SNRPNP63162 240 aaKnown RBP22.12■■□□□ 1.13
RAB40C-212ENST00000569575 RPS6KA2Q15349 733 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 NDUFAF5Q5TEU4 345 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 CGB2Q6NT52 195 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 FAM198BQ6UWH4 519 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 QSOX2Q6ZRP7 698 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 PIGWQ7Z7B1 504 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 IL22RA1Q8N6P7 574 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 EFCAB3Q8N7B9 438 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 ZNF248Q8NDW4 579 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 PLPP5Q8NEB5 264 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 OR5T3Q8NGG3 340 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 PEX11GQ96HA9 241 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 VPS50Q96JG6 964 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 OR52B2Q96RD2 323 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 PRPF18Q99633 342 aaKnown RBP22.12■■□□□ 1.13
RAB40C-212ENST00000569575 EBF4Q9BQW3 602 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 RPF2Q9H7B2 306 aaKnown RBP22.12■■□□□ 1.13
RAB40C-212ENST00000569575 AIG1Q9NVV5 245 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 HCN3Q9P1Z3 774 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 FBXW2Q9UKT8 454 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 FARSAQ9Y285 508 aaKnown RBP22.12■■□□□ 1.13
RAB40C-212ENST00000569575 DLGAP4Q9Y2H0 992 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 ATG4BQ9Y4P1 393 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 PCDHA9Q9Y5H5 950 aa22.12■■□□□ 1.13
RAB40C-212ENST00000569575 A0A1W2PR48 441 aa22.11■■□□□ 1.13
RAB40C-212ENST00000569575 CTNSO60931 367 aa22.11■■□□□ 1.13
RAB40C-212ENST00000569575 B3GALT4O96024 378 aa22.11■■□□□ 1.13
RAB40C-212ENST00000569575 SPINK2P20155 84 aa22.11■■□□□ 1.13
RAB40C-212ENST00000569575 DDCP20711 480 aa22.11■■□□□ 1.13
RAB40C-212ENST00000569575 CLNS1AP54105 237 aaKnown RBP22.11■■□□□ 1.13
RAB40C-212ENST00000569575 HNRNPH2P55795 449 aaKnown RBP22.11■■□□□ 1.13
RAB40C-212ENST00000569575 DPY19L1Q2PZI1 675 aa22.11■■□□□ 1.13
RAB40C-212ENST00000569575 MLIPQ5VWP3 458 aa22.11■■□□□ 1.13
RAB40C-212ENST00000569575 FAM219BQ5XKK7 198 aa22.11■■□□□ 1.13
RAB40C-212ENST00000569575 OR52E8Q6IFG1 317 aa22.11■■□□□ 1.13
RAB40C-212ENST00000569575 FAM71E1Q6IPT2 247 aa22.11■■□□□ 1.13
RAB40C-212ENST00000569575 CLNKQ7Z7G1 428 aa22.11■■□□□ 1.13
RAB40C-212ENST00000569575 ZC3H7AQ8IWR0 971 aaKnown RBP22.11■■□□□ 1.13
RAB40C-212ENST00000569575 LIX1Q8N485 282 aa22.11■■□□□ 1.13
RAB40C-212ENST00000569575 METTL27Q8N6F8 245 aaPredicted RBP22.11■■□□□ 1.13
RAB40C-212ENST00000569575 GLB1L3Q8NCI6 653 aaPredicted RBP22.11■■□□□ 1.13
RAB40C-212ENST00000569575 OR2Y1Q8NGV0 311 aa22.11■■□□□ 1.13
RAB40C-212ENST00000569575 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.11■■□□□ 1.13
RAB40C-212ENST00000569575 CCT8L2Q96SF2 557 aa22.11■■□□□ 1.13
RAB40C-212ENST00000569575 ELAC2Q9BQ52 826 aaKnown RBP22.11■■□□□ 1.13
RAB40C-212ENST00000569575 CCDC86Q9H6F5 360 aaKnown RBP22.11■■□□□ 1.13
RAB40C-212ENST00000569575 GBAP04062 536 aa22.1■■□□□ 1.13
RAB40C-212ENST00000569575 ADSLP30566 484 aaPredicted RBP22.1■■□□□ 1.13
RAB40C-212ENST00000569575 STX1BP61266 288 aa22.1■■□□□ 1.13
RAB40C-212ENST00000569575 OLR1P78380 273 aa22.1■■□□□ 1.13
RAB40C-212ENST00000569575 MAT1AQ00266 395 aaKnown RBP22.1■■□□□ 1.13
RAB40C-212ENST00000569575 DNASE1L3Q13609 305 aa22.1■■□□□ 1.13
RAB40C-212ENST00000569575 PDCD4Q53EL6 469 aaKnown RBP22.1■■□□□ 1.13
RAB40C-212ENST00000569575 CT55Q8WUE5 264 aa22.1■■□□□ 1.13
RAB40C-212ENST00000569575 EBPLQ9BY08 206 aa22.1■■□□□ 1.13
RAB40C-212ENST00000569575 SDR39U1Q9NRG7 319 aaPredicted RBP22.1■■□□□ 1.13
RAB40C-212ENST00000569575 SEMA3GQ9NS98 782 aa22.1■■□□□ 1.13
RAB40C-212ENST00000569575 ZIM2Q9NZV7 527 aa22.1■■□□□ 1.13
RAB40C-212ENST00000569575 GPR45Q9Y5Y3 372 aa22.1■■□□□ 1.13
RAB40C-212ENST00000569575 TERTO14746 1132 aaKnown RBP22.09■■□□□ 1.13
RAB40C-212ENST00000569575 G6PDP11413 515 aa22.09■■□□□ 1.13
RAB40C-212ENST00000569575 PTPN4P29074 926 aa22.09■■□□□ 1.13
RAB40C-212ENST00000569575 HPCAL1P37235 193 aa22.09■■□□□ 1.13
RAB40C-212ENST00000569575 C2orf80Q0P641 193 aa22.09■■□□□ 1.13
RAB40C-212ENST00000569575 SERTAD2Q14140 314 aa22.09■■□□□ 1.13
RAB40C-212ENST00000569575 GKAP1Q5VSY0 366 aaPredicted RBP22.09■■□□□ 1.13
RAB40C-212ENST00000569575 SLC48A1Q6P1K1 146 aa22.09■■□□□ 1.13
RAB40C-212ENST00000569575 DTWD1Q8N5C7 304 aa22.09■■□□□ 1.13
RAB40C-212ENST00000569575 C10orf82Q8WW14 230 aa22.09■■□□□ 1.13
RAB40C-212ENST00000569575 GATA6Q92908 595 aa22.09■■□□□ 1.13
RAB40C-212ENST00000569575 IP6K3Q96PC2 410 aa22.09■■□□□ 1.13
RAB40C-212ENST00000569575 SPSB2Q99619 263 aa22.09■■□□□ 1.13
RAB40C-212ENST00000569575 PELOQ9BRX2 385 aaKnown RBP22.09■■□□□ 1.13
RAB40C-212ENST00000569575 C1orf50Q9BV19 199 aa22.09■■□□□ 1.13
RAB40C-212ENST00000569575 REEP4Q9H6H4 257 aa22.09■■□□□ 1.13
RAB40C-212ENST00000569575 MIEF1Q9NQG6 463 aa22.09■■□□□ 1.13
RAB40C-212ENST00000569575 PRTFDC1Q9NRG1 225 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms