RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.58□□□□□ -0.082e-6■□□□□ 9.2
HERPUD1-215ENST00000568676 GOT1L1Q8NHS2 421 aaPredicted RBP14.58□□□□□ -0.08
HERPUD1-215ENST00000568676 NRGNQ92686 78 aa14.58□□□□□ -0.08
HERPUD1-215ENST00000568676 MBD6Q96DN6 1003 aa14.58□□□□□ -0.08
HERPUD1-215ENST00000568676 PBKQ96KB5 322 aa14.58□□□□□ -0.08
HERPUD1-215ENST00000568676 SCYL1Q96KG9 808 aa14.58□□□□□ -0.08
HERPUD1-215ENST00000568676 QRFPRQ96P65 431 aa14.58□□□□□ -0.08
HERPUD1-215ENST00000568676 EGFL8Q99944 293 aa14.58□□□□□ -0.08
HERPUD1-215ENST00000568676 ROGDIQ9GZN7 287 aa14.58□□□□□ -0.08
HERPUD1-215ENST00000568676 REXO4Q9GZR2 422 aaKnown RBP14.58□□□□□ -0.08
HERPUD1-215ENST00000568676 AICDAQ9GZX7 198 aa14.58□□□□□ -0.08
HERPUD1-215ENST00000568676 EHD1Q9H4M9 534 aa14.58□□□□□ -0.08
HERPUD1-215ENST00000568676 COPS7BQ9H9Q2 264 aaPredicted RBP14.58□□□□□ -0.08
HERPUD1-215ENST00000568676 ZNF358Q9NW07 568 aa14.58□□□□□ -0.08
HERPUD1-215ENST00000568676 GPRC5BQ9NZH0 403 aa14.58□□□□□ -0.08
HERPUD1-215ENST00000568676 COPS7AQ9UBW8 275 aa14.58□□□□□ -0.08
HERPUD1-215ENST00000568676 FOXD3Q9UJU5 478 aaPredicted RBP14.58□□□□□ -0.08
HERPUD1-215ENST00000568676 OARD1Q9Y530 152 aa14.58□□□□□ -0.08
HERPUD1-215ENST00000568676 ABCA2Q9BZC7 2435 aa14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 TRGV5A0A0B4J1U4 118 aa14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 SYT5O00445 386 aa14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 CYR61O00622 381 aa14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 NRDCO43847 1150 aa14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 PPP2R1BP30154 601 aa14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 HNRNPH1P31943 449 aaKnown RBP14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 FNTAP49354 379 aa14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 LIM2P55344 173 aa14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 RNF4P78317 190 aa14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 FOXO1Q12778 655 aa14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 ILF2Q12905 390 aaKnown RBP14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 ZNF750Q32MQ0 723 aa14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 C16orf47Q6ZP98 133 aaPredicted RBP14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 SLCO4C1Q6ZQN7 724 aa14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 ADAMTSL2Q86TH1 951 aa14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 ZZZ3Q8IYH5 903 aa14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 DND1Q8IYX4 353 aaKnown RBP14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 FBXW8Q8N3Y1 598 aa14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 FAM47BQ8NA70 645 aa14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 SRFBP1Q8NEF9 429 aaKnown RBP14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 PTPMT1Q8WUK0 201 aaPredicted RBP14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 CCT6BQ92526 530 aa14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 ALOXE3Q9BYJ1 711 aa14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 LYRM4Q9HD34 91 aa14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 PPANQ9NQ55 473 aaKnown RBP14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 QPCTLQ9NXS2 382 aa14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 LIPGQ9Y5X9 500 aa14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 ZNF407Q9C0G0 2248 aa14.57□□□□□ -0.08
HERPUD1-215ENST00000568676 A0A0G2JMM0 328 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 ATP6AP2A0A1C7CYW4 349 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 A0A1W2PPB8 328 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 A0A1W2PRS3 328 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 KIR3DP1A8MWS1 328 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 ATP6AP2O75787 350 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 WDR47O94967 919 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 GOSR1O95249 250 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 DRD2P14416 443 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 TNNI3P19429 210 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 ADH7P40394 386 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 NR0B1P51843 470 aaKnown RBP14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 HNRNPFP52597 415 aaKnown RBP14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 PLA2G16P53816 162 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 BIKQ13323 160 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 SLBPQ14493 270 aaKnown RBP eCLIP14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 CEBPEQ15744 281 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 FLYWCH1Q4VC44 716 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 FRA10AC1Q70Z53 315 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 WDR53Q7Z5U6 358 aaPredicted RBP14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 LIX1LQ8IVB5 337 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 SLC15A4Q8N697 577 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 TMEM52Q8NDY8 209 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 NUBPLQ8TB37 319 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 FAM222BQ8WU58 562 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 GPATCH1Q9BRR8 931 aaKnown RBP14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 OR8D2Q9GZM6 311 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 EXO5Q9H790 373 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 LIN28AQ9H9Z2 209 aaKnown RBP14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 DLL4Q9NR61 685 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 BOKQ9UMX3 212 aaPredicted RBP14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 ATG4BQ9Y4P1 393 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 SPACA6W5XKT8 324 aa14.56□□□□□ -0.08
HERPUD1-215ENST00000568676 A0A0G2JN53 185 aa14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 GOLGA6L10A0A0M3HER8 536 aa14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 A6NNC1 897 aa14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 C17orf105B2RV13 164 aa14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 PGRMC1O00264 195 aaKnown RBP14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 DVL2O14641 736 aa14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 DYRK3O43781 588 aa14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 COX7A2P14406 83 aa14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 SLC6A12P48065 614 aa14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 KCNC1P48547 511 aa14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 DGKQP52824 942 aa14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 FOXD4Q12950 439 aaPredicted RBP14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 PPP1R7Q15435 360 aa14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 FBXL19-AS1Q494R0 122 aa14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 SLC22A10Q63ZE4 541 aa14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 ABHD17CQ6PCB6 329 aa14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 CLNKQ7Z7G1 428 aa14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 TCAIMQ8N3R3 496 aa14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 SLC22A8Q8TCC7 542 aa14.55□□□□□ -0.08
HERPUD1-215ENST00000568676 SLC2A12Q8TD20 617 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms