RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 MEIKINA0A087WXM9 373 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 A0A0J9YYE9 177 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 TEX46H3BTG2 121 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 UBFD1O14562 309 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 KIAA0355O15063 1070 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 TXNDC12O95881 172 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 IFNA7P01567 189 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 SEMG1P04279 462 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 SFTPCP11686 197 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 KIR2DL3P43628 341 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 POLR2LP62875 67 aaKnown RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 TAF13Q15543 124 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 SGCAQ16586 387 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 OOSP2Q86WS3 158 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 ITFG1Q8TB96 612 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 ADAMTS19Q8TE59 1207 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 HYLS1Q96M11 299 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 COL21A1Q96P44 957 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 GBA2Q9HCG7 927 aaPredicted RBP2.81□□□□□ -1.96
CHD9-218ENST00000566029 HEBP1Q9NRV9 189 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 ABCC13Q9NSE7 274 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 NRBP2Q9NSY0 501 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 GNG8Q9UK08 70 aa2.81□□□□□ -1.96
CHD9-218ENST00000566029 COL2A1P02458 1487 aaPredicted RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 TRAV34A0A0B4J273 112 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 RHPN2P1A8MT19 583 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 LCMT2O60294 686 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 PTHP01270 115 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 F3P13726 295 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 PGAM2P15259 253 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 POU3F2P20265 443 aaPredicted RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 OMPP47874 163 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 RENBPP51606 427 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 MZT1Q08AG7 82 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 SMAD2Q15796 467 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 PLA1AQ53H76 456 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 PABPC1L2AQ5JQF8 200 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 OR2G6Q5TZ20 316 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 NADSYN1Q6IA69 706 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 KIAA0930Q6ICG6 404 aaPredicted RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 TMEM270Q6UE05 265 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 CNTN4Q8IWV2 1026 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 OR2M2Q96R28 347 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 C7orf50Q9BRJ6 194 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 RNF32Q9H0A6 362 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 LMAN2LQ9H0V9 348 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 DNAJC15Q9Y5T4 150 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 GPR45Q9Y5Y3 372 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 SLC22A7Q9Y694 548 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 OR2M5A3KFT3 312 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 AZIN1O14977 448 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 PGRP06401 933 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 DARSP14868 501 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 IDH2P48735 452 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 RAB13P51153 203 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 VSX2P58304 361 aaPredicted RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 ELP6Q0PNE2 266 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 TSTQ16762 297 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 FAM180BQ6P0A1 224 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 ATRAIDQ6UW56 229 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 ZER1Q7Z7L7 766 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 ATCAYQ86WG3 371 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 DUSP18Q8NEJ0 188 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 P2RY11Q96G91 374 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 ASB16Q96NS5 453 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 KXD1Q9BQD3 176 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 NTPCRQ9BSD7 190 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 FICDQ9BVA6 458 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 CDCA4Q9BXL8 241 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 MAGIXQ9H6Y5 334 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 RBFOX1Q9NWB1 397 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 RCOR3Q9P2K3 495 aaPredicted RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 PTGDR2Q9Y5Y4 395 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 ZNF670-ZNF695F2Z2N8 137 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 SLC30A4O14863 429 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 FABP7O15540 132 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 VPS4BO75351 444 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 RFPL3O75679 317 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 SRPRAP08240 638 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 SOX6P35712 828 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 RNF144AP50876 292 aaPredicted RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 CLCN5P51795 746 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 ETFDHQ16134 617 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 TDRD10Q5VZ19 366 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 KLHDC8BQ8IXV7 354 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 PGBD3Q8N328 593 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 FAM71CQ8NEG0 241 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 ZNF548Q8NEK5 533 aaPredicted RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 GMCL1Q96IK5 515 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 Q96MT0 163 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 LGMNQ99538 433 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 C19orf43Q9BQ61 176 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 AARSD1Q9BTE6 412 aaKnown RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 LRRC3Q9BY71 257 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 BARHL1Q9BZE3 327 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 SEBOXQ9HB31 216 aaPredicted RBP2.8□□□□□ -1.96
CHD9-218ENST00000566029 ARNT2Q9HBZ2 717 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 ZFP57Q9NU63 452 aa2.8□□□□□ -1.96
CHD9-218ENST00000566029 TREHO43280 583 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms