RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 KCNN2Q9H2S1 579 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 LINC00597Q9H2U6 94 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 TMCC3Q9ULS5 477 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 A0A1B0GVC2 190 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 SLC35F4A4IF30 521 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 A6NIN4 97 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 LYRM1O43325 122 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 HPGDSO60760 199 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 GCM2O75603 506 aaPredicted RBP15.57■□□□□ 0.08
LINC00554-201ENST00000564841 SLC6A4P31645 630 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 ZNF140P52738 457 aaPredicted RBP15.57■□□□□ 0.08
LINC00554-201ENST00000564841 EPHA5P54756 1037 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 ANGPTL8Q6UXH0 198 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 B3GLCTQ6Y288 498 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 LSRQ86X29 649 aaPredicted RBP15.57■□□□□ 0.08
LINC00554-201ENST00000564841 ZNF683Q8IZ20 524 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 ZNF366Q8N895 744 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 ZNF784Q8NCA9 323 aaPredicted RBP15.57■□□□□ 0.08
LINC00554-201ENST00000564841 CEP76Q8TAP6 659 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 LKAAEAR1Q8TD35 194 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 SLC25A46Q96AG3 418 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 ELOVL6Q9H5J4 265 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 PRM3Q9NNZ6 103 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 RBFOX1Q9NWB1 397 aaKnown RBP15.57■□□□□ 0.08
LINC00554-201ENST00000564841 TXNL4BQ9NX01 149 aaKnown RBP15.57■□□□□ 0.08
LINC00554-201ENST00000564841 WWOXQ9NZC7 414 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 ZNF222Q9UK12 451 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 PTPRDP23468 1912 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 SUV39H1O43463 412 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 RFPL3O75679 317 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 GKP32189 559 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 TALDO1P37837 337 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 NNMTP40261 264 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 MRPL58Q14197 206 aaKnown RBP15.57■□□□□ 0.08
LINC00554-201ENST00000564841 GRM7Q14831 915 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 EIF4HQ15056 248 aaKnown RBP15.57■□□□□ 0.08
LINC00554-201ENST00000564841 SNAPC1Q16533 368 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 TMEM81Q6P7N7 255 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 CNIH2Q6PI25 160 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 SLC39A5Q6ZMH5 540 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 CFAP77Q6ZQR2 320 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 DENND6BQ8NEG7 585 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 EPYCQ99645 322 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 VN1R3Q9BXE9 311 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 HEXA-AS1Q9H8Q6 139 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 SNX11Q9Y5W9 270 aa15.57■□□□□ 0.08
LINC00554-201ENST00000564841 ZFP37Q9Y6Q3 630 aaPredicted RBP15.57■□□□□ 0.08
LINC00554-201ENST00000564841 INMT-MINDY4F8WBC2 141 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 PRRG1O14668 218 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 INPPL1O15357 1258 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 PDE9AO76083 593 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 FGF1P05230 155 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 HOXD4P09016 255 aaPredicted RBP15.56■□□□□ 0.08
LINC00554-201ENST00000564841 FAM157BP0CG42 384 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 CTBP2P56545 445 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 CLDN8P56748 225 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 RHAGQ02094 409 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 TWF1Q12792 350 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 HKDC1Q2TB90 917 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 ATXN7L2Q5T6C5 722 aaPredicted RBP15.56■□□□□ 0.08
LINC00554-201ENST00000564841 PRSS42Q7Z5A4 293 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 CELF5Q8N6W0 485 aaKnown RBP15.56■□□□□ 0.08
LINC00554-201ENST00000564841 ZFP41Q8N8Y5 198 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 RACGAP1Q9H0H5 632 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 SPNS1Q9H2V7 528 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 NLE1Q9NVX2 485 aaPredicted RBP15.56■□□□□ 0.08
LINC00554-201ENST00000564841 TMEM248Q9NWD8 314 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 NUDT4Q9NZJ9 180 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 BNIP3LO60238 219 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 PCDH7O60245 1069 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 GNRH1P01148 92 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 HRGP04196 525 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 ALPIP09923 528 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 TEKQ02763 1124 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 C2orf80Q0P641 193 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 IL18Q14116 193 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 ASB18Q6ZVZ8 466 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 SERPINA11Q86U17 422 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 GDPD1Q8N9F7 314 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 FAM181AQ8N9Y4 354 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 OR52P1PQ8NH57 321 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 TMEM169Q96HH4 297 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 HYLS1Q96M11 299 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 BOCQ9BWV1 1114 aa15.56■□□□□ 0.08
LINC00554-201ENST00000564841 TRAV6A0A075B6T7 132 aa15.55■□□□□ 0.08
LINC00554-201ENST00000564841 C2orf78A6NCI8 922 aa15.55■□□□□ 0.08
LINC00554-201ENST00000564841 PITPNM1O00562 1244 aa15.55■□□□□ 0.08
LINC00554-201ENST00000564841 CSF2RAP15509 400 aa15.55■□□□□ 0.08
LINC00554-201ENST00000564841 BCL2L15Q5TBC7 163 aa15.55■□□□□ 0.08
LINC00554-201ENST00000564841 ZNF57Q68EA5 555 aaPredicted RBP15.55■□□□□ 0.08
LINC00554-201ENST00000564841 STK40Q8N2I9 435 aa15.55■□□□□ 0.08
LINC00554-201ENST00000564841 ZC4H2Q9NQZ6 224 aa15.55■□□□□ 0.08
LINC00554-201ENST00000564841 FAM8A1Q9UBU6 413 aa15.55■□□□□ 0.08
LINC00554-201ENST00000564841 AFF4Q9UHB7 1163 aaKnown RBP15.55■□□□□ 0.08
LINC00554-201ENST00000564841 STUB1Q9UNE7 303 aa15.55■□□□□ 0.08
LINC00554-201ENST00000564841 SSR3Q9UNL2 185 aa15.55■□□□□ 0.08
LINC00554-201ENST00000564841 LSM2Q9Y333 95 aaKnown RBP15.55■□□□□ 0.08
LINC00554-201ENST00000564841 A0A0A6YYJ9 748 aa15.55■□□□□ 0.08
LINC00554-201ENST00000564841 IQCMA0A1B0GVH7 501 aa15.55■□□□□ 0.08
LINC00554-201ENST00000564841 SLC28A1O00337 649 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms