RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 PARP9Q8IXQ6 854 aa15.03■□□□□ -0
RAB40C-208ENST00000564703 LSM14AQ8ND56 463 aaKnown RBP15.03■□□□□ -0
RAB40C-208ENST00000564703 TUBB6Q9BUF5 446 aa15.03■□□□□ -0
RAB40C-208ENST00000564703 ILKAPQ9H0C8 392 aaPredicted RBP15.03■□□□□ -0
RAB40C-208ENST00000564703 RIC8BQ9NVN3 520 aa15.03■□□□□ -0
RAB40C-208ENST00000564703 LOC102723996A0A087X1L8 192 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 A0A0A6YYD5 115 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 PROM1O43490 865 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 RGS14O43566 566 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 MYO1DO94832 1006 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 GBAP04062 536 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 FAM87AP0C7U9 286 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 MAOAP21397 527 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 ITGA3P26006 1051 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 PPP2R1BP30154 601 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 HTR6P50406 440 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 ABCE1P61221 599 aaKnown RBP15.02■□□□□ -0
RAB40C-208ENST00000564703 HMGCS1Q01581 520 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 EEF1A2Q05639 463 aaKnown RBP15.02■□□□□ -0
RAB40C-208ENST00000564703 BIKQ13323 160 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 SPIN4Q56A73 249 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 SFT2D3Q587I9 215 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 SH2D4BQ5SQS7 431 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 COMMD6Q7Z4G1 85 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 TRIM46Q7Z4K8 759 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 KIRREL3Q8IZU9 778 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 SHISA5Q8N114 240 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 C1orf52Q8N6N3 182 aaKnown RBP15.02■□□□□ -0
RAB40C-208ENST00000564703 AGR3Q8TD06 166 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 CHTF18Q8WVB6 975 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 TANKQ92844 425 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 LPAR4Q99677 370 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 SLC25A23Q9BV35 468 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 ACPTQ9BZG2 426 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 ZNF700Q9H0M5 742 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 RPF2Q9H7B2 306 aaKnown RBP15.02■□□□□ -0
RAB40C-208ENST00000564703 ZNF160Q9HCG1 818 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 TUBD1Q9UJT1 453 aa15.02■□□□□ -0
RAB40C-208ENST00000564703 IGHV1-45A0A0A0MS14 117 aa15.01□□□□□ -0.01
RAB40C-208ENST00000564703 GNG14A0A1W2PPG7 69 aa15.01□□□□□ -0.01
RAB40C-208ENST00000564703 EIF4E1BA6NMX2 242 aaKnown RBP15.01□□□□□ -0.01
RAB40C-208ENST00000564703 TMPRSS11DO60235 418 aa15.01□□□□□ -0.01
RAB40C-208ENST00000564703 IFNA16P05015 189 aa15.01□□□□□ -0.01
RAB40C-208ENST00000564703 CHN1P15882 459 aa15.01□□□□□ -0.01
RAB40C-208ENST00000564703 TNNI3P19429 210 aa15.01□□□□□ -0.01
RAB40C-208ENST00000564703 BGNP21810 368 aa15.01□□□□□ -0.01
RAB40C-208ENST00000564703 SLC1A6P48664 564 aa15.01□□□□□ -0.01
RAB40C-208ENST00000564703 TBL3Q12788 808 aaKnown RBP15.01□□□□□ -0.01
RAB40C-208ENST00000564703 KCNAB2Q13303 367 aa15.01□□□□□ -0.01
RAB40C-208ENST00000564703 SERTAD2Q14140 314 aa15.01□□□□□ -0.01
RAB40C-208ENST00000564703 CPZQ66K79 652 aa15.01□□□□□ -0.01
RAB40C-208ENST00000564703 ATG16L1Q676U5 607 aa15.01□□□□□ -0.01
RAB40C-208ENST00000564703 LANCL3Q6ZV70 420 aa15.01□□□□□ -0.01
RAB40C-208ENST00000564703 CLNKQ7Z7G1 428 aa15.01□□□□□ -0.01
RAB40C-208ENST00000564703 DDIASQ8IXT1 998 aa15.01□□□□□ -0.01
RAB40C-208ENST00000564703 KBTBD2Q8IY47 623 aa15.01□□□□□ -0.01
RAB40C-208ENST00000564703 GALNT16Q8N428 558 aa15.01□□□□□ -0.01
RAB40C-208ENST00000564703 OR6Y1Q8NGX8 325 aa15.01□□□□□ -0.01
RAB40C-208ENST00000564703 SH3GL2Q99962 352 aa15.01□□□□□ -0.01
RAB40C-208ENST00000564703 FAIM2Q9BWQ8 316 aa15.01□□□□□ -0.01
RAB40C-208ENST00000564703 ZNF717Q9BY31 904 aaPredicted RBP15.01□□□□□ -0.01
RAB40C-208ENST00000564703 ALOXE3Q9BYJ1 711 aa15.01□□□□□ -0.01
RAB40C-208ENST00000564703 TRIM55Q9BYV6 548 aa15.01□□□□□ -0.01
RAB40C-208ENST00000564703 NECTIN3Q9NQS3 549 aa15.01□□□□□ -0.01
RAB40C-208ENST00000564703 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.01□□□□□ -0.01
RAB40C-208ENST00000564703 ATG4BQ9Y4P1 393 aa15.01□□□□□ -0.01
RAB40C-208ENST00000564703 ASB4Q9Y574 426 aa15.01□□□□□ -0.01
RAB40C-208ENST00000564703 MED13Q9UHV7 2174 aa15□□□□□ -0.01
RAB40C-208ENST00000564703 CELSR3Q9NYQ7 3312 aa15□□□□□ -0.01
RAB40C-208ENST00000564703 IGHV3-20A0A0C4DH32 117 aa15□□□□□ -0.01
RAB40C-208ENST00000564703 ATXN7O15265 892 aaPredicted RBP15□□□□□ -0.01
RAB40C-208ENST00000564703 SEC22BO75396 215 aa15□□□□□ -0.01
RAB40C-208ENST00000564703 DNAJB5O75953 348 aa15□□□□□ -0.01
RAB40C-208ENST00000564703 SEC24DO94855 1032 aaPredicted RBP15□□□□□ -0.01
RAB40C-208ENST00000564703 LINC00032P0C843 101 aa15□□□□□ -0.01
RAB40C-208ENST00000564703 COX6A1P12074 109 aa15□□□□□ -0.01
RAB40C-208ENST00000564703 TPP2P29144 1249 aaPredicted RBP15□□□□□ -0.01
RAB40C-208ENST00000564703 HNRNPH2P55795 449 aaKnown RBP15□□□□□ -0.01
RAB40C-208ENST00000564703 SOX8P57073 446 aa15□□□□□ -0.01
RAB40C-208ENST00000564703 WDR4P57081 412 aaKnown RBP15□□□□□ -0.01
RAB40C-208ENST00000564703 TRA2BP62995 288 aaKnown RBP15□□□□□ -0.01
RAB40C-208ENST00000564703 EXT1Q16394 746 aa15□□□□□ -0.01
RAB40C-208ENST00000564703 KANK2Q63ZY3 851 aa15□□□□□ -0.01
RAB40C-208ENST00000564703 C18orf63Q68DL7 685 aa15□□□□□ -0.01
RAB40C-208ENST00000564703 MRM1Q6IN84 353 aaKnown RBP15□□□□□ -0.01
RAB40C-208ENST00000564703 TSLPQ969D9 159 aa15□□□□□ -0.01
RAB40C-208ENST00000564703 ABHD17AQ96GS6 310 aa15□□□□□ -0.01
RAB40C-208ENST00000564703 THOC3Q96J01 351 aaKnown RBP15□□□□□ -0.01
RAB40C-208ENST00000564703 CSF3RQ99062 836 aa15□□□□□ -0.01
RAB40C-208ENST00000564703 CCT7Q99832 543 aa15□□□□□ -0.01
RAB40C-208ENST00000564703 LHPPQ9H008 270 aa15□□□□□ -0.01
RAB40C-208ENST00000564703 TNFRSF12AQ9NP84 129 aa15□□□□□ -0.01
RAB40C-208ENST00000564703 PNO1Q9NRX1 252 aaKnown RBP15□□□□□ -0.01
RAB40C-208ENST00000564703 GPR83Q9NYM4 423 aa15□□□□□ -0.01
RAB40C-208ENST00000564703 ZDHHC2Q9UIJ5 367 aa15□□□□□ -0.01
RAB40C-208ENST00000564703 MCM8Q9UJA3 840 aa15□□□□□ -0.01
RAB40C-208ENST00000564703 PSME2Q9UL46 239 aa15□□□□□ -0.01
RAB40C-208ENST00000564703 DNAJC15Q9Y5T4 150 aa15□□□□□ -0.01
RAB40C-208ENST00000564703 ZZEF1O43149 2961 aa15□□□□□ -0.01
RAB40C-208ENST00000564703 A0A1W2PQ72 361 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms