RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 A0A1W2PPM1 405 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 ARHGAP10A1A4S6 786 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 SAGE2PA6NJ88 616 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 FOXE1O00358 373 aaPredicted RBP12.8□□□□□ -0.36
CNOT1-206ENST00000564557 COPEO14579 308 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 GPR37O15354 613 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 MYO1DO94832 1006 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 WDPCPO95876 746 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 RPS17P08708 135 aaKnown RBP12.8□□□□□ -0.36
CNOT1-206ENST00000564557 MYL2P10916 166 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 TSPAN8P19075 237 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 HSD17B3P37058 310 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 BUD31P41223 144 aaPredicted RBP12.8□□□□□ -0.36
CNOT1-206ENST00000564557 VSNL1P62760 191 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 CLCQ05315 142 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 CUL3Q13618 768 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 SERTAD2Q14140 314 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 ELOAQ14241 798 aaKnown RBP12.8□□□□□ -0.36
CNOT1-206ENST00000564557 ACER2Q5QJU3 275 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 FCRLBQ6BAA4 426 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 EMBQ6PCB8 327 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 THSD4Q6ZMP0 1018 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 ZNF793Q6ZN11 406 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 UBE3DQ7Z6J8 389 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 GPR180Q86V85 440 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 NUDT13Q86X67 352 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 SCUBE1Q8IWY4 988 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 TMEM132CQ8N3T6 1108 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 GALNT11Q8NCW6 608 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 CATSPER1Q8NEC5 780 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 OR4F6Q8NGB9 312 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 EPS8L3Q8TE67 593 aaKnown RBP12.8□□□□□ -0.36
CNOT1-206ENST00000564557 ZNF483Q8TF39 744 aaPredicted RBP12.8□□□□□ -0.36
CNOT1-206ENST00000564557 SELENOMQ8WWX9 145 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 SNRNP40Q96DI7 357 aaKnown RBP12.8□□□□□ -0.36
CNOT1-206ENST00000564557 UTP23Q9BRU9 249 aaKnown RBP12.8□□□□□ -0.36
CNOT1-206ENST00000564557 ZBTB26Q9HCK0 441 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 ADAP2Q9NPF8 381 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 LYARQ9NX58 379 aaKnown RBP12.8□□□□□ -0.36
CNOT1-206ENST00000564557 STK38LQ9Y2H1 464 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 CSAG2Q9Y5P2 127 aa12.8□□□□□ -0.36
CNOT1-206ENST00000564557 IGKV3D-11A0A0A0MRZ8 115 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 CCDC151A5D8V7 595 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 OR5H15A6NDH6 313 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 CYR61O00622 381 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 PLPP1O14494 284 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 DYRK3O43781 588 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 DLX3O60479 287 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 MLYCDO95822 493 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 KRT6AP02538 564 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 KRT6BP04259 564 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 SBK3P0C264 359 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 COX7A2P14406 83 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 IMPDH1P20839 514 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 PPP2R1BP30154 601 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 HMOX2P30519 316 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 KRT6CP48668 564 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 TNFSF10P50591 281 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 CLCN2P51788 898 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 OC90Q02509 493 aaPredicted RBP12.79□□□□□ -0.36
CNOT1-206ENST00000564557 TRAF3Q13114 568 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 BIKQ13323 160 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 RASA2Q15283 850 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 TERF2Q15554 542 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 CCDC153Q494R4 210 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 GGTA1PQ4G0N0 100 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 PRR30Q53SZ7 412 aaPredicted RBP12.79□□□□□ -0.36
CNOT1-206ENST00000564557 ZNF678Q5SXM1 525 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 FAM180AQ6UWF9 173 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 PAGE2Q7Z2X7 111 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 RPS19BP1Q86WX3 136 aaKnown RBP12.79□□□□□ -0.36
CNOT1-206ENST00000564557 CRLF3Q8IUI8 442 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 ZCCHC7Q8N3Z6 543 aaKnown RBP12.79□□□□□ -0.36
CNOT1-206ENST00000564557 TMEM151AQ8N4L1 468 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 HORMAD2Q8N7B1 307 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 ANKK1Q8NFD2 765 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 B3GNT7Q8NFL0 401 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 MYRIPQ8NFW9 859 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 WDR20Q8TBZ3 569 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 DAZLQ92904 295 aaKnown RBP12.79□□□□□ -0.36
CNOT1-206ENST00000564557 CSF3RQ99062 836 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 SORBS1Q9BX66 1292 aaKnown RBP12.79□□□□□ -0.36
CNOT1-206ENST00000564557 C1QTNF3Q9BXJ4 246 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 ALOXE3Q9BYJ1 711 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 RNF32Q9H0A6 362 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 CDCP1Q9H5V8 836 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 RPF2Q9H7B2 306 aaKnown RBP12.79□□□□□ -0.36
CNOT1-206ENST00000564557 ASF1BQ9NVP2 202 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 KCMF1Q9P0J7 381 aa12.79□□□□□ -0.36
CNOT1-206ENST00000564557 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.79□□□□□ -0.36
CNOT1-206ENST00000564557 V9GYY5 206 aaPredicted RBP12.79□□□□□ -0.36
CNOT1-206ENST00000564557 FCHO1O14526 889 aa12.78□□□□□ -0.36
CNOT1-206ENST00000564557 LDB3O75112 727 aa12.78□□□□□ -0.36
CNOT1-206ENST00000564557 SEMA3DO95025 777 aa12.78□□□□□ -0.36
CNOT1-206ENST00000564557 SCELO95171 688 aa12.78□□□□□ -0.36
CNOT1-206ENST00000564557 KRT4P19013 534 aa12.78□□□□□ -0.36
CNOT1-206ENST00000564557 HNRNPFP52597 415 aaKnown RBP12.78□□□□□ -0.36
CNOT1-206ENST00000564557 PRKAA2P54646 552 aa12.78□□□□□ -0.36
CNOT1-206ENST00000564557 NAA20P61599 178 aa12.78□□□□□ -0.36
CNOT1-206ENST00000564557 ELAVL1Q15717 326 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms