RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 PEPDP12955 493 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 DRD5P21918 477 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 CDKN2CP42773 168 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 CRISP3P54108 245 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 DOC2AQ14183 400 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 CCDC58Q4VC31 144 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 PYCR3Q53H96 274 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 GPRC6AQ5T6X5 926 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 SLITRK4Q8IW52 837 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 FAM109AQ8N4B1 249 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 HMGCLL1Q8TB92 370 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 ZNF296Q8WUU4 475 aaPredicted RBP12.1□□□□□ -0.47
COMMD4-209ENST00000564068 RHBDF1Q96CC6 855 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 C3orf14Q9HBI5 128 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 FBXO8Q9NRD0 319 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 ZNF69Q9UC07 566 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 ABHD14A-ACY1A0A1B0GW23 586 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 NEDD8-MDP1E9PL57 170 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 J3QLW9 94 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 DUSP11O75319 330 aaKnown RBP12.1□□□□□ -0.47
COMMD4-209ENST00000564068 HLA-DQA2P01906 255 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 ALPPL2P10696 532 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 ZNF19P17023 458 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 FNTBP49356 437 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 ZNF763Q0D2J5 394 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 GPR19Q15760 415 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 MICAQ29983 383 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 LACC1Q8IV20 430 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 ENTHD1Q8IYW4 607 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 SCRN2Q96FV2 425 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 SECISBP2Q96T21 854 aaKnown RBP12.1□□□□□ -0.47
COMMD4-209ENST00000564068 IFT27Q9BW83 186 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 NMNAT1Q9HAN9 279 aaPredicted RBP12.1□□□□□ -0.47
COMMD4-209ENST00000564068 NTN4Q9HB63 628 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 RNF186Q9NXI6 227 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 UBQLN2Q9UHD9 624 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 GPSM3Q9Y4H4 160 aa12.1□□□□□ -0.47
COMMD4-209ENST00000564068 DOCK2Q92608 1830 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 A0A0U1RQF3 1178 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 LOC285095A0A1B0GVY8 99 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 TTC34A8MYJ7 566 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 GFRA2O00451 464 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 SMAD9O15198 467 aaKnown RBP12.09□□□□□ -0.47
COMMD4-209ENST00000564068 GJB5O95377 273 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 APOC3P02656 99 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 S100A6P06703 90 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 ATXN1LP0C7T5 689 aaKnown RBP12.09□□□□□ -0.47
COMMD4-209ENST00000564068 ATP1B2P14415 290 aaPredicted RBP12.09□□□□□ -0.47
COMMD4-209ENST00000564068 EVI2BP34910 448 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 MAGEA2P43356 314 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 RGRP47804 291 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 SELENOWP63302 87 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 EIF4HQ15056 248 aaKnown RBP12.09□□□□□ -0.47
COMMD4-209ENST00000564068 RGNQ15493 299 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 LEXMQ3ZCV2 418 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 TMEM179BQ7Z7N9 219 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 ZNF300Q96RE9 604 aaPredicted RBP12.09□□□□□ -0.47
COMMD4-209ENST00000564068 C11orf84Q9BUA3 381 aaPredicted RBP12.09□□□□□ -0.47
COMMD4-209ENST00000564068 CACNG6Q9BXT2 260 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 GON7Q9BXV9 100 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 IKZF5Q9H5V7 419 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 REEP4Q9H6H4 257 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 PLSCR3Q9NRY6 295 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 ERVW-1Q9UQF0 538 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 NME7Q9Y5B8 376 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 SMLR1H3BR10 107 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 SLC9A3R1O14745 358 aaPredicted RBP12.09□□□□□ -0.47
COMMD4-209ENST00000564068 MRPS14O60783 128 aaKnown RBP12.09□□□□□ -0.47
COMMD4-209ENST00000564068 ZNF792Q3KQV3 632 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 ARHGAP15Q53QZ3 475 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 OLFML2AQ68BL7 652 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 FRRS1Q6ZNA5 592 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 ZNF280BQ86YH2 543 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 TTC9BQ8N6N2 239 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 SUV39H2Q9H5I1 410 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 CLMPQ9H6B4 373 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 NUDT15Q9NV35 164 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 MRPL15Q9P015 296 aaKnown RBP12.09□□□□□ -0.47
COMMD4-209ENST00000564068 SLX4Q8IY92 1834 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 OR2A25A4D2G3 310 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 PCDH17O14917 1159 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 IGFBP6P24592 240 aaPredicted RBP12.09□□□□□ -0.47
COMMD4-209ENST00000564068 HOXD11P31277 338 aaPredicted RBP12.09□□□□□ -0.47
COMMD4-209ENST00000564068 HMGCLP35914 325 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 FRMPD2BQ6IN97 320 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 SLC25A25Q6KCM7 469 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 NCEH1Q6PIU2 408 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 SRFBP1Q8NEF9 429 aaKnown RBP12.09□□□□□ -0.47
COMMD4-209ENST00000564068 OR2T35Q8NGX2 323 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 TM9SF2Q99805 663 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 HOXD1Q9GZZ0 328 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 RANBP3Q9H6Z4 567 aaPredicted RBP12.09□□□□□ -0.47
COMMD4-209ENST00000564068 IMP3Q9NV31 184 aaKnown RBP12.09□□□□□ -0.47
COMMD4-209ENST00000564068 MED11Q9P086 117 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 PSORS1C1Q9UIG5 152 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 RABL2BQ9UNT1 228 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 ZNF780BQ9Y6R6 833 aa12.09□□□□□ -0.47
COMMD4-209ENST00000564068 MROH6A6NGR9 719 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 RIIAD1A6NNX1 92 aa12.08□□□□□ -0.48
COMMD4-209ENST00000564068 PRMT3O60678 531 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms