RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 LIPJQ5W064 366 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 ERN2Q76MJ5 926 aaKnown RBP2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 ADCK2Q7Z695 626 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 MEX3DQ86XN8 651 aaKnown RBP2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 SLC22A18ASQ8N1D0 253 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 ELMOD1Q8N336 334 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 SMYD1Q8NB12 490 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 CLEC1AQ8NC01 280 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 C8orf46Q8TAG6 207 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 GPR148Q8TDV2 347 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 ZBED6CLQ96FA7 236 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 FER1L6-AS2Q96M78 137 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 ZNF285Q96NJ3 590 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 SIGLEC12Q96PQ1 595 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 MAPKAP1Q9BPZ7 522 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 RABEP2Q9H5N1 569 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 ZNF446Q9NWS9 450 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 VNN3Q9NY84 501 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 CLIC5Q9NZA1 410 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 CCL27Q9Y4X3 112 aa2.26□□□□□ -2.05
HMGB1P33-201ENST00000563485 A0A0B4J203 849 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 NEDD8-MDP1E9PL57 170 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 SAP18O00422 153 aaKnown RBP2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 SCO2O43819 266 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 PDGFRAP16234 1089 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 GPX3P22352 226 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 MDH2P40926 338 aaKnown RBP2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 ID1P41134 155 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 ALDH3B1P43353 468 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 TNFRSF4P43489 277 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 ABRQ12979 859 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 CEACAM7Q14002 265 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 GSG1Q2KHT4 349 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 SLC30A6Q6NXT4 461 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 RPUSD3Q6P087 351 aaKnown RBP2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 NLRP14Q86W24 1093 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 CREBRFQ8IUR6 639 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 TMEM99Q8N816 258 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 SAMD12Q8N8I0 201 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 ZNF491Q8N8L2 437 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 SAP25Q8TEE9 199 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 NTNG2Q96CW9 530 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 PRMT1Q99873 361 aaKnown RBP2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 CCM2Q9BSQ5 444 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 CENPOQ9BU64 300 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 S100A14Q9HCY8 104 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 PDRG1Q9NUG6 133 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 MED17Q9NVC6 651 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 PLEKHA6Q9Y2H5 1048 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 NTNG1Q9Y2I2 539 aa2.25□□□□□ -2.05
HMGB1P33-201ENST00000563485 A0A087WV48 116 aa2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 CCDC162PA2VCL2 907 aa2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 TNFSF11O14788 317 aa2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 LYNP07948 512 aa2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 FHP07954 510 aa2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 ADRA2CP18825 462 aa2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 ELK1P19419 428 aa2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 ACKR3P25106 362 aa2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 NPY4RP50391 375 aa2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 NAGLUP54802 743 aa2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 CETN1Q12798 172 aa2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 C9orf129Q5T035 196 aaKnown RBP2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 FAM91A1Q658Y4 838 aa2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 ZNF776Q68DI1 518 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 C16orf54Q6UWD8 224 aa2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 ZNF730Q6ZMV8 503 aa2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 KRT74Q7RTS7 529 aa2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 CACUL1Q86Y37 369 aa2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 BEST4Q8NFU0 473 aa2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 KIF18AQ8NI77 898 aa2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 RIT1Q92963 219 aa2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 ZNF274Q96GC6 653 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 PAXXQ9BUH6 204 aa2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 TRIM7Q9C029 511 aa2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 NT5DC2Q9H857 520 aa2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 PLSCR3Q9NRY6 295 aa2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 CHCHD3Q9NX63 227 aaKnown RBP2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 ADAM22Q9P0K1 906 aa2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 RCOR3Q9P2K3 495 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 GMEB2Q9UKD1 530 aa2.24□□□□□ -2.05
HMGB1P33-201ENST00000563485 ANKDD1BA6NHY2 528 aa2.23□□□□□ -2.05
HMGB1P33-201ENST00000563485 HMGB1P1B2RPK0 211 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P33-201ENST00000563485 MCF2LO15068 1137 aa2.23□□□□□ -2.05
HMGB1P33-201ENST00000563485 GBAP04062 536 aa2.23□□□□□ -2.05
HMGB1P33-201ENST00000563485 PTAFRP25105 342 aa2.23□□□□□ -2.05
HMGB1P33-201ENST00000563485 GDF1P27539 372 aa2.23□□□□□ -2.05
HMGB1P33-201ENST00000563485 PPP2R1AP30153 589 aa2.23□□□□□ -2.05
HMGB1P33-201ENST00000563485 TIA1P31483 386 aaKnown RBP eCLIP2.23□□□□□ -2.05
HMGB1P33-201ENST00000563485 FHITP49789 147 aa2.23□□□□□ -2.05
HMGB1P33-201ENST00000563485 RAD23AP54725 363 aa2.23□□□□□ -2.05
HMGB1P33-201ENST00000563485 CXCL6P80162 114 aa2.23□□□□□ -2.05
HMGB1P33-201ENST00000563485 SPOUT1Q5T280 376 aaKnown RBP2.23□□□□□ -2.05
HMGB1P33-201ENST00000563485 SHEQ5VZ18 495 aa2.23□□□□□ -2.05
HMGB1P33-201ENST00000563485 ZNF530Q6P9A1 599 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P33-201ENST00000563485 CCDC186Q7Z3E2 898 aa2.23□□□□□ -2.05
HMGB1P33-201ENST00000563485 PHLDB2Q86SQ0 1253 aa2.23□□□□□ -2.05
HMGB1P33-201ENST00000563485 UBQLNLQ8IYU4 475 aa2.23□□□□□ -2.05
HMGB1P33-201ENST00000563485 U2AF1L4Q8WU68 220 aaKnown RBP2.23□□□□□ -2.05
HMGB1P33-201ENST00000563485 SEPT8Q92599 483 aa2.23□□□□□ -2.05
HMGB1P33-201ENST00000563485 RBM18Q96H35 190 aaKnown RBP2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms