RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 C6orf136Q5SQH8 315 aa17.73■□□□□ 0.43
RAB40C-207ENST00000563109 ACAD11Q709F0 780 aa17.73■□□□□ 0.43
RAB40C-207ENST00000563109 RAB43Q86YS6 212 aa17.73■□□□□ 0.43
RAB40C-207ENST00000563109 PARP9Q8IXQ6 854 aa17.73■□□□□ 0.43
RAB40C-207ENST00000563109 C11orf24Q96F05 449 aaPredicted RBP17.73■□□□□ 0.43
RAB40C-207ENST00000563109 SLC45A3Q96JT2 553 aa17.73■□□□□ 0.43
RAB40C-207ENST00000563109 SIKE1Q9BRV8 207 aa17.73■□□□□ 0.43
RAB40C-207ENST00000563109 AKTIPQ9H8T0 292 aa17.73■□□□□ 0.43
RAB40C-207ENST00000563109 PRTFDC1Q9NRG1 225 aa17.73■□□□□ 0.43
RAB40C-207ENST00000563109 SEMA3GQ9NS98 782 aa17.73■□□□□ 0.43
RAB40C-207ENST00000563109 GIMAP2Q9UG22 337 aa17.73■□□□□ 0.43
RAB40C-207ENST00000563109 EIF3LQ9Y262 564 aaKnown RBP17.73■□□□□ 0.43
RAB40C-207ENST00000563109 ATG4BQ9Y4P1 393 aa17.73■□□□□ 0.43
RAB40C-207ENST00000563109 MMACHCQ9Y4U1 282 aa17.73■□□□□ 0.43
RAB40C-207ENST00000563109 MRPS18BQ9Y676 258 aaKnown RBP17.73■□□□□ 0.43
RAB40C-207ENST00000563109 AHCTF1Q8WYP5 2266 aa17.73■□□□□ 0.43
RAB40C-207ENST00000563109 WDFY3Q8IZQ1 3526 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 ZNF891A8MT65 544 aaPredicted RBP17.72■□□□□ 0.43
RAB40C-207ENST00000563109 FAM227AF5H4B4 570 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 CYR61O00622 381 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 PROM1O43490 865 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 CREG1O75629 220 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 AIFM1O95831 613 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 LBPP18428 481 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 PPP2R1BP30154 601 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 UCNP55089 124 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 ERVK-8P63133 956 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 SLC13A2Q13183 592 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 KIAA0040Q15053 153 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 RFTN2Q52LD8 501 aaPredicted RBP17.72■□□□□ 0.43
RAB40C-207ENST00000563109 NDUFAF5Q5TEU4 345 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 VWA5B1Q5TIE3 1220 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 NXNQ6DKJ4 435 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 OR52E8Q6IFG1 317 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 QSOX2Q6ZRP7 698 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 MED25Q71SY5 747 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 TMEM132CQ8N3T6 1108 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 KDF1Q8NAX2 398 aaPredicted RBP17.72■□□□□ 0.43
RAB40C-207ENST00000563109 C16orf78Q8WTQ4 265 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 METTL21AQ8WXB1 218 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 VPS50Q96JG6 964 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 FCRL1Q96LA6 429 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 C1orf50Q9BV19 199 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 TRIM55Q9BYV6 548 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 VN1R1Q9GZP7 353 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 RPF2Q9H7B2 306 aaKnown RBP17.72■□□□□ 0.43
RAB40C-207ENST00000563109 PRDM9Q9NQV7 894 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 LANCL2Q9NS86 450 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 FGFR1OP2Q9NVK5 253 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 TEX10Q9NXF1 929 aaPredicted RBP17.72■□□□□ 0.43
RAB40C-207ENST00000563109 FAM53CQ9NYF3 392 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 NOP53Q9NZM5 478 aaKnown RBP17.72■□□□□ 0.43
RAB40C-207ENST00000563109 CEP295Q9C0D2 2601 aa17.72■□□□□ 0.43
RAB40C-207ENST00000563109 CCDC88CQ9P219 2028 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 GOLGA8QA0A0J9YX86 632 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 A0A1W2PR48 441 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 GOLGA8OA6NCC3 632 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 SYNDIG1LA6NDD5 238 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 GOLGA8NF8WBI6 632 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 PCDH17O14917 1159 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 PRMT3O60678 531 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 UMODP07911 640 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 PRR35P0CG20 571 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 PRPS2P11908 318 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 ALOX15P16050 662 aaPredicted RBP17.71■□□□□ 0.43
RAB40C-207ENST00000563109 EPHA3P29320 983 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 OTX2P32243 289 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 GYS2P54840 703 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 AQP5P55064 265 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 HSD17B7P56937 341 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 FOXL2P58012 376 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 TAS2R50P59544 299 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 EMX2Q04743 252 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 SRSF6Q13247 344 aaKnown RBP17.71■□□□□ 0.43
RAB40C-207ENST00000563109 SSPNQ14714 243 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 HEPACAMQ14CZ8 416 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 FAM69BQ5VUD6 431 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 C18orf63Q68DL7 685 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 CCDC81Q6ZN84 652 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 IKBIPQ70UQ0 350 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 MAVSQ7Z434 540 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 TANKQ92844 425 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 TM4SF18Q96CE8 201 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 WDR55Q9H6Y2 383 aaPredicted RBP17.71■□□□□ 0.43
RAB40C-207ENST00000563109 NPHS2Q9NP85 383 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 MYNNQ9NPC7 610 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 C19orf25Q9UFG5 118 aaPredicted RBP17.71■□□□□ 0.43
RAB40C-207ENST00000563109 DLGAP4Q9Y2H0 992 aa17.71■□□□□ 0.43
RAB40C-207ENST00000563109 WBP11Q9Y2W2 641 aaKnown RBP17.71■□□□□ 0.43
RAB40C-207ENST00000563109 C1orf226A1L170 272 aa17.7■□□□□ 0.42
RAB40C-207ENST00000563109 ZNF195O14628 629 aa17.7■□□□□ 0.42
RAB40C-207ENST00000563109 ALOX12BO75342 701 aa17.7■□□□□ 0.42
RAB40C-207ENST00000563109 IL3P08700 152 aa17.7■□□□□ 0.42
RAB40C-207ENST00000563109 C8orf89P0DMQ9 161 aa17.7■□□□□ 0.42
RAB40C-207ENST00000563109 SDC1P18827 310 aa17.7■□□□□ 0.42
RAB40C-207ENST00000563109 ASMTP46597 345 aa17.7■□□□□ 0.42
RAB40C-207ENST00000563109 ALDH9A1P49189 494 aa17.7■□□□□ 0.42
RAB40C-207ENST00000563109 GNGT1P63211 74 aa17.7■□□□□ 0.42
RAB40C-207ENST00000563109 RHAGQ02094 409 aa17.7■□□□□ 0.42
RAB40C-207ENST00000563109 SLC9B1Q4ZJI4 515 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms