RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 DND1Q8IYX4 353 aaKnown RBP2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 RIT1Q92963 219 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 ST6GALNAC6Q969X2 333 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 PAPOLGQ9BWT3 736 aaKnown RBP2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 OCR1Q9BZK8 76 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 JPT2Q9H910 190 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 CHCHD3Q9NX63 227 aaKnown RBP2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 DBF4Q9UBU7 674 aaPredicted RBP2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 GIMAP2Q9UG22 337 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 NOCTQ9UK39 431 aaKnown RBP2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 NCKAP1Q9Y2A7 1128 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 DAPK1P53355 1430 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 MYOM3Q5VTT5 1437 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 RIMS2Q9UQ26 1411 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 KIF15Q9NS87 1388 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 MYH14Q7Z406 1995 aaKnown RBP2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 NKTRP30414 1462 aaKnown RBP2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 A0A0B4J203 849 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 C2orf92A0A1B0GVN3 265 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 C5orf52A6NGY3 159 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 PDHXO00330 501 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 TBCAO75347 108 aaKnown RBP2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 LRCH4O75427 683 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 KRT3P12035 628 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 PSMB4P28070 264 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 TIA1P31483 386 aaKnown RBP eCLIP2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 FCGR2BP31994 310 aaPredicted RBP2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 FCGR2CP31995 323 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 FEN1P39748 380 aaKnown RBP2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 CLCN4P51793 760 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 ZFP36L1Q07352 338 aaKnown RBP2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 SCN1BQ07699 218 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 CETN1Q12798 172 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 MLF2Q15773 248 aaPredicted RBP2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 ZRANB3Q5FWF4 1079 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 KLHL10Q6JEL2 608 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 TRAT1Q6PIZ9 186 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 RAPH1Q70E73 1250 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 MEX3DQ86XN8 651 aaKnown RBP2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 OR4N5Q8IXE1 308 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 C11orf52Q96A22 123 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 INTS14Q96SY0 518 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 ZNF577Q9BSK1 485 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 TRIM7Q9C029 511 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 KCNK13Q9HB14 408 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 TMOD3Q9NYL9 352 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 TSPAN16Q9UKR8 245 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 MRPS18CQ9Y3D5 142 aaKnown RBP2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 TRIOBPQ9H2D6 2365 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 GLI3P10071 1580 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 SPHKAPQ2M3C7 1700 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 METP08581 1390 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 MSH6P52701 1360 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 PNPLA6Q8IY17 1366 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 PLEKHG1Q9ULL1 1385 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 TRPM2O94759 1503 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 LMTK2Q8IWU2 1503 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 ASXL1Q8IXJ9 1541 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 KIF1BO60333 1816 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 ARID2Q68CP9 1835 aa2.47□□□□□ -2.01
HDGFL3-202ENST00000562702 LAMC1P11047 1609 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 CLTCL1P53675 1640 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 FGD6Q6ZV73 1430 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 VPS8Q8N3P4 1428 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 TRAV34A0A0B4J273 112 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 GLTPD2A6NH11 291 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 SHISA9B4DS77 424 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 SIGLEC5O15389 551 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 BCL2L11O43521 198 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 SCO2O43819 266 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 HPP00738 406 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 RLN1P04808 185 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 SELEP16581 610 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 CALRP27797 417 aaKnown RBP2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 SOAT1P35610 550 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 SLC1A3P43003 542 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 NPBWR1P48145 328 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 HLCSP50747 726 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 LIMK2P53671 638 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 CRYBA2P53672 197 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 ABCE1P61221 599 aaKnown RBP2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 RPP38P78345 283 aaKnown RBP2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 MAPK11Q15759 364 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 C15orf32Q32M92 178 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 LRRC37A5PQ49AS3 106 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 ARMCX4Q5H9R4 360 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 SLC27A4Q6P1M0 643 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 Q6ZVQ6 151 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 Q71RC1 249 aaPredicted RBP2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 C5orf24Q7Z6I8 188 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 DEFB132Q7Z7B7 95 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 CREBRFQ8IUR6 639 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 FAM9BQ8IZU0 186 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 FAM162AQ96A26 154 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 EXOC4Q96A65 974 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 BSCL2Q96G97 398 aaPredicted RBP2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 UBAC1Q9BSL1 405 aa2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 RBM24Q9BX46 236 aaKnown RBP2.46□□□□□ -2.02
HDGFL3-202ENST00000562702 STRADBQ9C0K7 418 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms