RNA–Protein interactions for RNA: ENST00000562307.1

CDH13-205, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-205ENST00000562307 ATP6V1C1P21283 382 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 ZNF10P21506 573 aaPredicted RBP9.02□□□□□ -0.97
CDH13-205ENST00000562307 CERS1P27544 350 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 PEX2P28328 305 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 MAGEA8P43361 318 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 GPR3P46089 330 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 GABRA4P48169 554 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 ALDH9A1P49189 494 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 DHPSP49366 369 aaPredicted RBP9.02□□□□□ -0.97
CDH13-205ENST00000562307 MANFP55145 182 aaKnown RBP9.02□□□□□ -0.97
CDH13-205ENST00000562307 SNRPNP63162 240 aaKnown RBP9.02□□□□□ -0.97
CDH13-205ENST00000562307 CSTF1Q05048 431 aaKnown RBP9.02□□□□□ -0.97
CDH13-205ENST00000562307 RBBP4Q09028 425 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 BNIP3Q12983 259 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 PRTGQ2VWP7 1150 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 FAM98BQ52LJ0 330 aaKnown RBP9.02□□□□□ -0.97
CDH13-205ENST00000562307 ZC3H12BQ5HYM0 836 aaKnown RBP9.02□□□□□ -0.97
CDH13-205ENST00000562307 SAXO2Q658L1 398 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 FKBP9P1Q75LS8 142 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 ABHD13Q7L211 337 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 KANSL1Q7Z3B3 1105 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 PDSS2Q86YH6 399 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 CARFQ8N187 725 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 C19orf47Q8N9M1 422 aaKnown RBP9.02□□□□□ -0.97
CDH13-205ENST00000562307 FAM110BQ8TC76 370 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 KLHL6Q8WZ60 621 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 FIG4Q92562 907 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 RERGQ96A58 199 aaPredicted RBP9.02□□□□□ -0.97
CDH13-205ENST00000562307 NEURL3Q96EH8 262 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 TCTN2Q96GX1 697 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 C10orf90Q96M02 699 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 ZNF285Q96NJ3 590 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 AMDHD1Q96NU7 426 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 CD180Q99467 661 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 ZNF184Q99676 751 aaPredicted RBP9.02□□□□□ -0.97
CDH13-205ENST00000562307 MAPKAP1Q9BPZ7 522 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 DPH2Q9BQC3 489 aaPredicted RBP9.02□□□□□ -0.97
CDH13-205ENST00000562307 UGT2B28Q9BY64 529 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 ASPSCR1Q9BZE9 553 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 KLHL25Q9H0H3 589 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 EPB41L1Q9H4G0 881 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 TMEM38AQ9H6F2 299 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 MAGIXQ9H6Y5 334 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 LYRM4Q9HD34 91 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 NEUROD4Q9HD90 331 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 FAM60AQ9NP50 221 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 SIRT3Q9NTG7 399 aaPredicted RBP9.02□□□□□ -0.97
CDH13-205ENST00000562307 TMEM74BQ9NUR3 256 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 MS4A12Q9NXJ0 267 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 PHF11Q9UIL8 331 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 AURKCQ9UQB9 309 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 RNF215Q9Y6U7 377 aa9.02□□□□□ -0.97
CDH13-205ENST00000562307 CEP192Q8TEP8 1941 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 A0A1B0GTQ1 180 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 TMEM221A6NGB7 291 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 TLCD2A6NGC4 264 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 SLC9B1P1A6NJY1 282 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 RHPN2P1A8MT19 583 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 M0R296 226 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 B3GALT2O43825 422 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 SDC3O75056 442 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 PRSS23O95084 383 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 RAP2AP10114 183 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 GLB1P16278 677 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 ZNF26P17031 533 aaPredicted RBP9.01□□□□□ -0.97
CDH13-205ENST00000562307 CDH3P22223 829 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 FASP25445 335 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 KDELR2P33947 212 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 CNR2P34972 360 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 PCGF2P35227 344 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 SOX11P35716 441 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 ARRB1P49407 418 aaPredicted RBP9.01□□□□□ -0.97
CDH13-205ENST00000562307 EEF1A2Q05639 463 aaKnown RBP9.01□□□□□ -0.97
CDH13-205ENST00000562307 CHRNB3Q05901 458 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 SRSF5Q13243 272 aaKnown RBP9.01□□□□□ -0.97
CDH13-205ENST00000562307 RUNX2Q13950 521 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 ELOAQ14241 798 aaKnown RBP9.01□□□□□ -0.97
CDH13-205ENST00000562307 TAF11Q15544 211 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 ATP6AP1Q15904 470 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 SFT2D3Q587I9 215 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 COX20Q5RI15 118 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.01□□□□□ -0.97
CDH13-205ENST00000562307 C18orf63Q68DL7 685 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 IZUMO2Q6UXV1 221 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 TMEM64Q6YI46 380 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 CCDC80Q76M96 950 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 MCATQ8IVS2 390 aaKnown RBP9.01□□□□□ -0.97
CDH13-205ENST00000562307 SLC35F3Q8IY50 421 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 CLEC4FQ8N1N0 589 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 CSNK1A1LQ8N752 337 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 ARL10Q8N8L6 244 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 ZFP28Q8NHY6 868 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 FAM162AQ96A26 154 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 EXOSC8Q96B26 276 aaKnown RBP9.01□□□□□ -0.97
CDH13-205ENST00000562307 CENPNQ96H22 339 aaPredicted RBP9.01□□□□□ -0.97
CDH13-205ENST00000562307 PYURFQ96I23 114 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 ZNF681Q96N22 645 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 NECAB3Q96P71 396 aaPredicted RBP9.01□□□□□ -0.97
CDH13-205ENST00000562307 BTBD9Q96Q07 612 aa9.01□□□□□ -0.97
CDH13-205ENST00000562307 MAP3K3Q99759 626 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms