RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 ADPRHL2Q9NX46 363 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 PKD2L2Q9NZM6 624 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 DNAJB9Q9UBS3 223 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 KCNG2Q9UJ96 466 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 GMEB2Q9UKD1 530 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 MAN1B1Q9UKM7 699 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 RAB23Q9ULC3 237 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 GRID1Q9ULK0 1009 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 CHKBQ9Y259 395 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 WDR83OSQ9Y284 106 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 ITM2BQ9Y287 266 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 TRANK1O15050 2925 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 PTPRFP10586 1907 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 NEDD4P46934 1319 aa3.38□□□□□ -1.87
HERC1-215ENST00000561436 SETXQ7Z333 2677 aaKnown RBP3.37□□□□□ -1.87
HERC1-215ENST00000561436 EYSQ5T1H1 3165 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 PRUNE2Q8WUY3 3088 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 LRRC37A2A6NM11 1700 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 A0A0D9SFI3 127 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 ESYT2A0FGR8 921 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 FAM86B1E9PN63 330 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 SLC33A1O00400 549 aaPredicted RBP3.37□□□□□ -1.87
HERC1-215ENST00000561436 EPHB6O15197 1021 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 GRID2O43424 1007 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 ECI2O75521 394 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 CRCPO75575 148 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 ATP6AP2O75787 350 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 FAM86B2P0C5J1 330 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 ITGA3P26006 1051 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 AXLP30530 894 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 HAND2P61296 217 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 CACNG1Q06432 222 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 SULT2A1Q06520 285 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 NCBP1Q09161 790 aaKnown RBP3.37□□□□□ -1.87
HERC1-215ENST00000561436 ELAVL2Q12926 359 aaKnown RBP3.37□□□□□ -1.87
HERC1-215ENST00000561436 GPR17Q13304 367 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 SLMAPQ14BN4 828 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 E2F5Q15329 346 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 PTPN14Q15678 1187 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 TAZQ16635 292 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 MEP1BQ16820 701 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 CTU2Q2VPK5 515 aaKnown RBP3.37□□□□□ -1.87
HERC1-215ENST00000561436 PDLIM3Q53GG5 364 aaPredicted RBP3.37□□□□□ -1.87
HERC1-215ENST00000561436 LACTB2Q53H82 288 aaPredicted RBP3.37□□□□□ -1.87
HERC1-215ENST00000561436 ZRANB3Q5FWF4 1079 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.37□□□□□ -1.87
HERC1-215ENST00000561436 STPG1Q5TH74 334 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 LCN1P1Q5VSP4 162 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 CEACAM20Q6UY09 585 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 Q6ZTC4 211 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 ANO5Q75V66 913 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 OTOAQ7RTW8 1153 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 RTN4RL2Q86UN3 420 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 ZNF589Q86UQ0 364 aaPredicted RBP3.37□□□□□ -1.87
HERC1-215ENST00000561436 FAM228AQ86W67 206 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 TUSC5Q8IXB3 177 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 CCDC170Q8IYT3 715 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 EID3Q8N140 333 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 C10orf53Q8N6V4 93 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 BMPERQ8N8U9 685 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 CCDC12Q8WUD4 166 aaPredicted RBP3.37□□□□□ -1.87
HERC1-215ENST00000561436 PYCR2Q96C36 320 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 RIT2Q99578 217 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 SLC2A11Q9BYW1 496 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 MMP28Q9H239 520 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 CPVLQ9H3G5 476 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 RWDD1Q9H446 243 aaPredicted RBP3.37□□□□□ -1.87
HERC1-215ENST00000561436 MINDY3Q9H8M7 445 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 Q9H8V8 135 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 RNF121Q9H920 327 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 DNAJC4Q9NNZ3 241 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 PRMT8Q9NR22 394 aaPredicted RBP3.37□□□□□ -1.87
HERC1-215ENST00000561436 SDR39U1Q9NRG7 319 aaPredicted RBP3.37□□□□□ -1.87
HERC1-215ENST00000561436 RBM28Q9NW13 759 aaKnown RBP3.37□□□□□ -1.87
HERC1-215ENST00000561436 ANGPTL2Q9UKU9 493 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 LIPT1Q9Y234 373 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 KCNK7Q9Y2U2 307 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 CLUHO75153 1309 aa3.37□□□□□ -1.87
HERC1-215ENST00000561436 MYH2Q9UKX2 1941 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 IGKV6-21A0A0C4DH24 114 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 C5orf52A6NGY3 159 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 CASTOR2A6NHX0 329 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 BMPR1BO00238 502 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 FLRT2O43155 660 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 SLC7A4O43246 635 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 PCDH7O60245 1069 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 CIDEAO60543 219 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 LMX1BO60663 402 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 SLC22A3O75751 556 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 RAD51DO75771 328 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 AKAP3O75969 853 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 BAG2O95816 211 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 IGHV4-31P0DP07 118 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 VDRP11473 427 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 ANOS1P23352 680 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 GNA11P29992 359 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 CEACAM8P31997 349 aaPredicted RBP3.36□□□□□ -1.87
HERC1-215ENST00000561436 NPBWR1P48145 328 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 GPC3P51654 580 aa3.36□□□□□ -1.87
HERC1-215ENST00000561436 SNU13P55769 128 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms