RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	NANOG	Q9H9S0	305 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	LHX9	Q9NQ69	397 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	FAM120C	Q9NX05	1096 aa	Known RBP	7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	VAPA	Q9P0L0	249 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	GMPR2	Q9P2T1	348 aa	Known RBP	7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	STX18	Q9P2W9	335 aa	Known RBP	7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	BCAP29	Q9UHQ4	241 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	ATP6V1H	Q9UI12	483 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	ADAM29	Q9UKF5	820 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	DOLK	Q9UPQ8	538 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	EXO1	Q9UQ84	846 aa	Known RBP	7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	KLHL20	Q9Y2M5	609 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	L3MBTL1	Q9Y468	752 aa		7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	HEMK1	Q9Y5R4	338 aa	Predicted RBP	7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	USP9Y	O00507	2555 aa	Predicted RBP	7.15	□□□□□ -1.26
TPM1-231	ENST00000561395	CACNA1D	Q01668	2161 aa		7.15	□□□□□ -1.27
TPM1-231	ENST00000561395		A0A0A6YYD5	115 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	LRIT2	A6NDA9	550 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	OR5K3	A6NET4	321 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	GABRR3	A8MPY1	467 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	C4orf51	C9J302	202 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	RTCA	O00442	366 aa	Known RBP	7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	CAPN5	O15484	640 aa	Predicted RBP	7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	SCN2B	O60939	215 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	LDOC1	O95751	146 aa	Predicted RBP	7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	B3GALT4	O96024	378 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	SERPIND1	P05546	499 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	C8B	P07358	591 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	IL3	P08700	152 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	FURIN	P09958	794 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	LAMP1	P11279	417 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	PIM1	P11309	404 aa	Predicted RBP	7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	GP1BB	P13224	206 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	MAG	P20916	626 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	PTPN6	P29350	595 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	CTSK	P43235	329 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	SSR2	P43308	183 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	LSS	P48449	732 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	TRPC1	P48995	793 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	GSK3B	P49841	420 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	ERF	P50548	548 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	ARFIP1	P53367	373 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	MTPN	P58546	118 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	TAS2R50	P59544	299 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	AP2B1	P63010	937 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	LIPE	Q05469	1076 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	KLC1	Q07866	573 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	VAC14	Q08AM6	782 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	HYAL2	Q12891	473 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	NFATC3	Q12968	1075 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	BNIP2	Q12982	314 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	ILK	Q13418	452 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	GTDC1	Q4AE62	458 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	ZNF385B	Q569K4	471 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	RUNDC3A	Q59EK9	446 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	CCNYL2	Q5T2Q4	361 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	CPTP	Q5TA50	214 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	ANXA8L1	Q5VT79	327 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	FCRL6	Q6DN72	434 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	ANKRD26P1	Q6NSI1	321 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	AAGAB	Q6PD74	315 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	FIGLA	Q6QHK4	219 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	ZNF574	Q6ZN55	896 aa	Predicted RBP	7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	RNF44	Q7L0R7	432 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	VN1R4	Q7Z5H5	301 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	ANKRD46	Q86W74	232 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	OOSP2	Q86WS3	158 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	NUDT13	Q86X67	352 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	ZNF761	Q86XN6	746 aa	Predicted RBP	7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	GATAD2A	Q86YP4	633 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	TMEM132C	Q8N3T6	1108 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	ARL14	Q8N4G2	192 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	HIPK4	Q8NE63	616 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	NT5C	Q8TCD5	201 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	PYDC1	Q8WXC3	89 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	RSC1A1	Q92681	617 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	COQ8B	Q96D53	544 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	MS4A6E	Q96DS6	147 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	MTERF3	Q96E29	417 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	CCDC115	Q96NT0	180 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	ANKRD27	Q96NW4	1050 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	PRPF18	Q99633	342 aa	Known RBP	7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	CPPED1	Q9BRF8	314 aa	Predicted RBP	7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	INPP5K	Q9BT40	448 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	DUSP26	Q9BV47	211 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	BHLHE41	Q9C0J9	482 aa	Predicted RBP	7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	SLC6A16	Q9GZN6	736 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	PCDHAC1	Q9H158	963 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	MUC13	Q9H3R2	512 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	KLHL31	Q9H511	634 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	ALG2	Q9H553	416 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	ERVMER34-1	Q9H9K5	563 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	S100A14	Q9HCY8	104 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	SLC6A13	Q9NSD5	602 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	ATAD3A	Q9NVI7	634 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	HRASLS2	Q9NWW9	162 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	SLC25A37	Q9NYZ2	338 aa		7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	7.14	□□□□□ -1.27
TPM1-231	ENST00000561395	POMT2	Q9UKY4	750 aa		7.14	□□□□□ -1.27

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