RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 STARD5Q9NSY2 213 aa9.76□□□□□ -0.85
USP3-219ENST00000561326 ACSS1Q9NUB1 689 aaPredicted RBP9.76□□□□□ -0.85
USP3-219ENST00000561326 TEX10Q9NXF1 929 aaPredicted RBP9.76□□□□□ -0.85
USP3-219ENST00000561326 KCMF1Q9P0J7 381 aa9.76□□□□□ -0.85
USP3-219ENST00000561326 ATXN7L1Q9ULK2 861 aaPredicted RBP9.76□□□□□ -0.85
USP3-219ENST00000561326 DAPP1Q9UN19 280 aa9.76□□□□□ -0.85
USP3-219ENST00000561326 VPS4AQ9UN37 437 aa9.76□□□□□ -0.85
USP3-219ENST00000561326 CDC14AQ9UNH5 594 aa9.76□□□□□ -0.85
USP3-219ENST00000561326 CORO2BQ9UQ03 480 aa9.76□□□□□ -0.85
USP3-219ENST00000561326 EXO1Q9UQ84 846 aaKnown RBP9.76□□□□□ -0.85
USP3-219ENST00000561326 CLCA2Q9UQC9 943 aa9.76□□□□□ -0.85
USP3-219ENST00000561326 NAALAD2Q9Y3Q0 740 aa9.76□□□□□ -0.85
USP3-219ENST00000561326 ATG4BQ9Y4P1 393 aa9.76□□□□□ -0.85
USP3-219ENST00000561326 PCDHA9Q9Y5H5 950 aa9.76□□□□□ -0.85
USP3-219ENST00000561326 ZNF780BQ9Y6R6 833 aa9.76□□□□□ -0.85
USP3-219ENST00000561326 WDFY4Q6ZS81 3184 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 CCDC88CQ9P219 2028 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 MUC3AQ02505 3323 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 A0A1W2PQM1 296 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 A0A1W2PR48 441 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 BLACEA4D250 179 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 TMEM150CB9EJG8 249 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 CDX4O14627 284 aaPredicted RBP9.75□□□□□ -0.85
USP3-219ENST00000561326 PDPK1O15530 556 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 HCRTR1O43613 425 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 GMNNO75496 209 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 LMNAP02545 664 aaKnown RBP9.75□□□□□ -0.85
USP3-219ENST00000561326 NR2F6P10588 404 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 CSNK2A2P19784 350 aaPredicted RBP9.75□□□□□ -0.85
USP3-219ENST00000561326 NTSP30990 170 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 MPIP34949 423 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 LIM2P55344 173 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 ITGA1P56199 1179 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 WNT3P56703 355 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 E2F1Q01094 437 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 RUNX2Q13950 521 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 MAP7Q14244 749 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 TRIM25Q14258 630 aaKnown RBP9.75□□□□□ -0.85
USP3-219ENST00000561326 CAPRIN1Q14444 709 aaKnown RBP9.75□□□□□ -0.85
USP3-219ENST00000561326 CSRP2Q16527 193 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 RUNDC3AQ59EK9 446 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 SLC48A1Q6P1K1 146 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 ZNF574Q6ZN55 896 aaPredicted RBP9.75□□□□□ -0.85
USP3-219ENST00000561326 ARHGAP22Q7Z5H3 698 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 KIAA2013Q8IYS2 634 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 FAM13CQ8NE31 585 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 OR4A15Q8NGL6 344 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 GOT1L1Q8NHS2 421 aaPredicted RBP9.75□□□□□ -0.85
USP3-219ENST00000561326 ADAMTS18Q8TE60 1221 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 OR5P2Q8WZ92 322 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 TANKQ92844 425 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 TMEM125Q96AQ2 219 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 EXOSC8Q96B26 276 aaKnown RBP9.75□□□□□ -0.85
USP3-219ENST00000561326 MVB12AQ96EY5 273 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 CLPTM1LQ96KA5 538 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 PHF12Q96QT6 1004 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 MAPKAP1Q9BPZ7 522 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 NDC1Q9BTX1 674 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 EDEM2Q9BV94 578 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 SPRTNQ9H040 489 aaPredicted RBP9.75□□□□□ -0.85
USP3-219ENST00000561326 PAIP1Q9H074 479 aaKnown RBP9.75□□□□□ -0.85
USP3-219ENST00000561326 SERHLQ9NQF3 203 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 ENAMQ9NRM1 1142 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 FGF21Q9NSA1 209 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 SEMA4GQ9NTN9 838 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 TAS2R9Q9NYW1 312 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 VAPAQ9P0L0 249 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 TMEM9Q9P0T7 183 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 SLAMF8Q9P0V8 285 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 ABCD2Q9UBJ2 740 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 ZNF282Q9UDV7 671 aaPredicted RBP9.75□□□□□ -0.85
USP3-219ENST00000561326 SLC7A8Q9UHI5 535 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 UTS2RQ9UKP6 389 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 ENTPD4Q9Y227 616 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 MRPS33Q9Y291 106 aaKnown RBP9.75□□□□□ -0.85
USP3-219ENST00000561326 BTBD3Q9Y2F9 522 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 PCDHB14Q9Y5E9 798 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 KNTC1P50748 2209 aa9.75□□□□□ -0.85
USP3-219ENST00000561326 ADAMTS20P59510 1910 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 IGHV5-10-1A0A0J9YXX1 117 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 C4orf51C9J302 202 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 H0YIG0 161 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 TMX2-CTNND1H3BSU7 103 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 FXYD1O00168 92 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 CLIC1O00299 241 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 PGRMC2O15173 223 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 SCN2BO60939 215 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 ERAL1O75616 437 aaKnown RBP9.74□□□□□ -0.85
USP3-219ENST00000561326 PDE5AO76074 875 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 NSA2O95478 260 aaKnown RBP9.74□□□□□ -0.85
USP3-219ENST00000561326 KRT75O95678 551 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 AIFM1O95831 613 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 B3GALT4O96024 378 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 GSNP06396 782 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 RNH1P13489 461 aaKnown RBP9.74□□□□□ -0.85
USP3-219ENST00000561326 CD59P13987 128 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 HSD17B1P14061 328 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 FOLR1P15328 257 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 IL1RNP18510 177 aa9.74□□□□□ -0.85
USP3-219ENST00000561326 PPP2R1BP30154 601 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms