RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 RCN2Q14257 317 aa16.04■□□□□ 0.16
CDC42BPB-208ENST00000561271 ACAP2Q15057 778 aa16.04■□□□□ 0.16
CDC42BPB-208ENST00000561271 MAPKAPK3Q16644 382 aa16.04■□□□□ 0.16
CDC42BPB-208ENST00000561271 TMEM35AQ53FP2 167 aa16.04■□□□□ 0.16
CDC42BPB-208ENST00000561271 KHDRBS2Q5VWX1 349 aaKnown RBP16.04■□□□□ 0.16
CDC42BPB-208ENST00000561271 GOLGA7Q7Z5G4 137 aa16.04■□□□□ 0.16
CDC42BPB-208ENST00000561271 HORMAD2Q8N7B1 307 aa16.04■□□□□ 0.16
CDC42BPB-208ENST00000561271 SRFBP1Q8NEF9 429 aaKnown RBP16.04■□□□□ 0.16
CDC42BPB-208ENST00000561271 HUS1BQ8NHY5 278 aa16.04■□□□□ 0.16
CDC42BPB-208ENST00000561271 UHMK1Q8TAS1 419 aaKnown RBP16.04■□□□□ 0.16
CDC42BPB-208ENST00000561271 MTERF1Q99551 399 aaKnown RBP16.04■□□□□ 0.16
CDC42BPB-208ENST00000561271 TBCDQ9BTW9 1192 aa16.04■□□□□ 0.16
CDC42BPB-208ENST00000561271 ROGDIQ9GZN7 287 aa16.04■□□□□ 0.16
CDC42BPB-208ENST00000561271 ACTR8Q9H981 624 aa16.04■□□□□ 0.16
CDC42BPB-208ENST00000561271 LYRM4Q9HD34 91 aa16.04■□□□□ 0.16
CDC42BPB-208ENST00000561271 DMRT3Q9NQL9 472 aa16.04■□□□□ 0.16
CDC42BPB-208ENST00000561271 ZNF358Q9NW07 568 aa16.04■□□□□ 0.16
CDC42BPB-208ENST00000561271 KCMF1Q9P0J7 381 aa16.04■□□□□ 0.16
CDC42BPB-208ENST00000561271 SH3BGRL2Q9UJC5 107 aa16.04■□□□□ 0.16
CDC42BPB-208ENST00000561271 TRGV8A0A0C4DH27 118 aa16.03■□□□□ 0.16
CDC42BPB-208ENST00000561271 A0A1B0GUH1 482 aa16.03■□□□□ 0.16
CDC42BPB-208ENST00000561271 CCDC189A1A4V9 331 aa16.03■□□□□ 0.16
CDC42BPB-208ENST00000561271 ASPDHA6ND91 283 aa16.03■□□□□ 0.16
CDC42BPB-208ENST00000561271 PRKNO60260 465 aaPredicted RBP16.03■□□□□ 0.16
CDC42BPB-208ENST00000561271 SCELO95171 688 aa16.03■□□□□ 0.16
CDC42BPB-208ENST00000561271 IFNA16P05015 189 aa16.03■□□□□ 0.16
CDC42BPB-208ENST00000561271 MAGEA12P43365 314 aa16.03■□□□□ 0.16
CDC42BPB-208ENST00000561271 ALDH6A1Q02252 535 aaKnown RBP16.03■□□□□ 0.16
CDC42BPB-208ENST00000561271 PCDH1Q08174 1060 aa16.03■□□□□ 0.16
CDC42BPB-208ENST00000561271 GTF2H2Q13888 395 aa16.03■□□□□ 0.16
CDC42BPB-208ENST00000561271 ELAVL1Q15717 326 aaKnown RBP16.03■□□□□ 0.16
CDC42BPB-208ENST00000561271 AP5B1Q2VPB7 878 aa16.03■□□□□ 0.16
CDC42BPB-208ENST00000561271 ZNF787Q6DD87 383 aa16.03■□□□□ 0.16
CDC42BPB-208ENST00000561271 SLC25A25Q6KCM7 469 aa16.03■□□□□ 0.16
CDC42BPB-208ENST00000561271 GTF2H2CQ6P1K8 395 aa16.03■□□□□ 0.16
CDC42BPB-208ENST00000561271 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.03■□□□□ 0.16
CDC42BPB-208ENST00000561271 ARMC10Q8N2F6 343 aa16.03■□□□□ 0.16
CDC42BPB-208ENST00000561271 CPSF7Q8N684 471 aaKnown RBP16.03■□□□□ 0.16
CDC42BPB-208ENST00000561271 PTGR2Q8N8N7 351 aaPredicted RBP16.03■□□□□ 0.16
CDC42BPB-208ENST00000561271 FAM98AQ8NCA5 519 aaKnown RBP16.03■□□□□ 0.16
CDC42BPB-208ENST00000561271 ISL2Q96A47 359 aa16.03■□□□□ 0.16
CDC42BPB-208ENST00000561271 CMTM7Q96FZ5 175 aa16.03■□□□□ 0.16
CDC42BPB-208ENST00000561271 XPR1Q9UBH6 696 aa16.03■□□□□ 0.16
CDC42BPB-208ENST00000561271 PPIEQ9UNP9 301 aaKnown RBP16.03■□□□□ 0.16
CDC42BPB-208ENST00000561271 POC1B-GALNT4F8VUJ3 575 aa16.02■□□□□ 0.16
CDC42BPB-208ENST00000561271 CTNSO60931 367 aa16.02■□□□□ 0.16
CDC42BPB-208ENST00000561271 ITGA10O75578 1167 aa16.02■□□□□ 0.16
CDC42BPB-208ENST00000561271 TRHRP34981 398 aaPredicted RBP16.02■□□□□ 0.16
CDC42BPB-208ENST00000561271 HLCSP50747 726 aa16.02■□□□□ 0.16
CDC42BPB-208ENST00000561271 GPR143P51810 404 aa16.02■□□□□ 0.16
CDC42BPB-208ENST00000561271 RAP1GDS1P52306 607 aa16.02■□□□□ 0.16
CDC42BPB-208ENST00000561271 RPS13P62277 151 aaKnown RBP16.02■□□□□ 0.16
CDC42BPB-208ENST00000561271 STX4Q12846 297 aa16.02■□□□□ 0.16
CDC42BPB-208ENST00000561271 PCBP2Q15366 365 aaKnown RBP eCLIP16.02■□□□□ 0.16
CDC42BPB-208ENST00000561271 ZRSR2Q15696 482 aaKnown RBP16.02■□□□□ 0.16
CDC42BPB-208ENST00000561271 C16orf47Q6ZP98 133 aaPredicted RBP16.02■□□□□ 0.16
CDC42BPB-208ENST00000561271 CHSY3Q70JA7 882 aa16.02■□□□□ 0.16
CDC42BPB-208ENST00000561271 TAOK1Q7L7X3 1001 aa16.02■□□□□ 0.16
CDC42BPB-208ENST00000561271 GPR137Q96N19 417 aa16.02■□□□□ 0.16
CDC42BPB-208ENST00000561271 CCDC77Q9BR77 488 aa16.02■□□□□ 0.16
CDC42BPB-208ENST00000561271 ALOXE3Q9BYJ1 711 aa16.02■□□□□ 0.16
CDC42BPB-208ENST00000561271 TSPYL1Q9H0U9 437 aa16.02■□□□□ 0.16
CDC42BPB-208ENST00000561271 LIN28AQ9H9Z2 209 aaKnown RBP16.02■□□□□ 0.16
CDC42BPB-208ENST00000561271 IKBKGQ9Y6K9 419 aa16.02■□□□□ 0.16
CDC42BPB-208ENST00000561271 CLCA3PQ9Y6N3 262 aa16.02■□□□□ 0.16
CDC42BPB-208ENST00000561271 SPACA6W5XKT8 324 aa16.02■□□□□ 0.16
CDC42BPB-208ENST00000561271 NPIPA5E9PKD4 350 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 PLPP1O14494 284 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 PRKRAO75569 313 aaKnown RBP16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 ZNF24P17028 368 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 CPN2P22792 545 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 DCTP40126 519 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 ARL1P40616 181 aaPredicted RBP16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 PIK3CBP42338 1070 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 PIK3CGP48736 1102 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 SERPINB9P50453 376 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 CPSF6Q16630 551 aaKnown RBP eCLIP16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 GLE1Q53GS7 698 aaKnown RBP16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 RNFT1Q5M7Z0 435 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 DEPDC1Q5TB30 811 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 LIPJQ5W064 366 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 SIAH3Q8IW03 269 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 CYP4Z2PQ8N1L4 340 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 TMEM132CQ8N3T6 1108 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 TMEM156Q8N614 296 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 ZNF321PQ8N8H1 164 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 OR14A16Q8NHC5 309 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 DCAKDQ8WVC6 231 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 RELTQ969Z4 430 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 TMEM125Q96AQ2 219 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 SCYL1Q96KG9 808 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 CDK15Q96Q40 435 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 OR8D2Q9GZM6 311 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 TRIM45Q9H8W5 580 aaPredicted RBP16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 IPPKQ9H8X2 491 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 NPIPA1Q9UND3 350 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 RNF11Q9Y3C5 154 aa16.01■□□□□ 0.15
CDC42BPB-208ENST00000561271 ABCA12Q86UK0 2595 aa16■□□□□ 0.15
CDC42BPB-208ENST00000561271 C17orf105B2RV13 164 aa16■□□□□ 0.15
CDC42BPB-208ENST00000561271 TRIM49D1C9J1S8 452 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms