RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 FRMD7Q6ZUT3 714 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 KBTBD2Q8IY47 623 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 ZCCHC7Q8N3Z6 543 aaKnown RBP13.02□□□□□ -0.33
TPM1-230ENST00000561266 CCDC63Q8NA47 563 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 CATSPER1Q8NEC5 780 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 SRFBP1Q8NEF9 429 aaKnown RBP13.02□□□□□ -0.33
TPM1-230ENST00000561266 REPS1Q96D71 796 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 TUBB6Q9BUF5 446 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 EPN3Q9H201 632 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 PRM3Q9NNZ6 103 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 RIC8BQ9NVN3 520 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 PLA2G3Q9NZ20 509 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 PTGFRNQ9P2B2 879 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 PPT2Q9UMR5 302 aa13.02□□□□□ -0.33
TPM1-230ENST00000561266 PROM1O43490 865 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 FGF17O60258 216 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 ESRRBO95718 433 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 F10P00742 488 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 CPN2P22792 545 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 ETV4P43268 484 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 SLC26A5P58743 744 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 ACTN3Q08043 901 aaPredicted RBP13.01□□□□□ -0.33
TPM1-230ENST00000561266 TGM3Q08188 693 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 KLRB1Q12918 225 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 LCP2Q13094 533 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 IFT88Q13099 833 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 PRR30Q53SZ7 412 aaPredicted RBP13.01□□□□□ -0.33
TPM1-230ENST00000561266 SLC6A19Q695T7 634 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 JMJD6Q6NYC1 403 aaPredicted RBP13.01□□□□□ -0.33
TPM1-230ENST00000561266 IGFL3Q6UXB1 125 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 DGAT2L6Q6ZPD8 337 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 PRICKLE2Q7Z3G6 844 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 ZNF595Q8IYB9 648 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 MMP21Q8N119 569 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 METTL4Q8N3J2 472 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 MYRIPQ8NFW9 859 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 RDH11Q8TC12 318 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 METTL6Q8TCB7 284 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 DOK4Q8TEW6 326 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 SELENOMQ8WWX9 145 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 MAGEB10Q96LZ2 347 aaPredicted RBP13.01□□□□□ -0.33
TPM1-230ENST00000561266 SERPINI1Q99574 410 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 ACPTQ9BZG2 426 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 ELOVL6Q9H5J4 265 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 MID1IP1Q9NPA3 183 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 C5AR2Q9P296 337 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 C19orf25Q9UFG5 118 aaPredicted RBP13.01□□□□□ -0.33
TPM1-230ENST00000561266 ZNF223Q9UK11 482 aaPredicted RBP13.01□□□□□ -0.33
TPM1-230ENST00000561266 SLC12A4Q9UP95 1085 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 MMACHCQ9Y4U1 282 aa13.01□□□□□ -0.33
TPM1-230ENST00000561266 A0A088AWK7 358 aa13□□□□□ -0.33
TPM1-230ENST00000561266 SAGE2PA6NJ88 616 aa13□□□□□ -0.33
TPM1-230ENST00000561266 GLOD5A6NK44 160 aa13□□□□□ -0.33
TPM1-230ENST00000561266 PCDH17O14917 1159 aa13□□□□□ -0.33
TPM1-230ENST00000561266 PGRMC2O15173 223 aa13□□□□□ -0.33
TPM1-230ENST00000561266 SLC28A2O43868 658 aa13□□□□□ -0.33
TPM1-230ENST00000561266 CTNSO60931 367 aa13□□□□□ -0.33
TPM1-230ENST00000561266 KLK1P06870 262 aa13□□□□□ -0.33
TPM1-230ENST00000561266 FAM58BPP0C7Q3 252 aa13□□□□□ -0.33
TPM1-230ENST00000561266 ZNF10P21506 573 aaPredicted RBP13□□□□□ -0.33
TPM1-230ENST00000561266 HPDP32754 393 aaPredicted RBP13□□□□□ -0.33
TPM1-230ENST00000561266 GPR143P51810 404 aa13□□□□□ -0.33
TPM1-230ENST00000561266 MLLT10P55197 1068 aa13□□□□□ -0.33
TPM1-230ENST00000561266 PKNOX1P55347 436 aa13□□□□□ -0.33
TPM1-230ENST00000561266 HSD17B7P56937 341 aa13□□□□□ -0.33
TPM1-230ENST00000561266 RAE1P78406 368 aaKnown RBP13□□□□□ -0.33
TPM1-230ENST00000561266 HMGCS1Q01581 520 aa13□□□□□ -0.33
TPM1-230ENST00000561266 SLC13A2Q13183 592 aa13□□□□□ -0.33
TPM1-230ENST00000561266 AGAP7PQ5VUJ5 663 aa13□□□□□ -0.33
TPM1-230ENST00000561266 LIPMQ5VYY2 423 aa13□□□□□ -0.33
TPM1-230ENST00000561266 H3F3CQ6NXT2 135 aa13□□□□□ -0.33
TPM1-230ENST00000561266 ZCCHC23Q6ZST2 131 aa13□□□□□ -0.33
TPM1-230ENST00000561266 COMMD6Q7Z4G1 85 aa13□□□□□ -0.33
TPM1-230ENST00000561266 ZNF605Q86T29 641 aa13□□□□□ -0.33
TPM1-230ENST00000561266 GPR180Q86V85 440 aa13□□□□□ -0.33
TPM1-230ENST00000561266 CNPY4Q8N129 248 aa13□□□□□ -0.33
TPM1-230ENST00000561266 EFCAB3Q8N7B9 438 aa13□□□□□ -0.33
TPM1-230ENST00000561266 ZNF321PQ8N8H1 164 aa13□□□□□ -0.33
TPM1-230ENST00000561266 TEX19Q8NA77 164 aa13□□□□□ -0.33
TPM1-230ENST00000561266 ELP5Q8TE02 316 aa13□□□□□ -0.33
TPM1-230ENST00000561266 AGAP4Q96P64 663 aa13□□□□□ -0.33
TPM1-230ENST00000561266 LPAR4Q99677 370 aa13□□□□□ -0.33
TPM1-230ENST00000561266 ALOXE3Q9BYJ1 711 aa13□□□□□ -0.33
TPM1-230ENST00000561266 SLC29A3Q9BZD2 475 aa13□□□□□ -0.33
TPM1-230ENST00000561266 ROGDIQ9GZN7 287 aa13□□□□□ -0.33
TPM1-230ENST00000561266 PNO1Q9NRX1 252 aaKnown RBP13□□□□□ -0.33
TPM1-230ENST00000561266 TEX10Q9NXF1 929 aaPredicted RBP13□□□□□ -0.33
TPM1-230ENST00000561266 SNX6Q9UNH7 406 aa13□□□□□ -0.33
TPM1-230ENST00000561266 PCDHGB7Q9Y5F8 929 aa13□□□□□ -0.33
TPM1-230ENST00000561266 PTGDR2Q9Y5Y4 395 aa13□□□□□ -0.33
TPM1-230ENST00000561266 EML6Q6ZMW3 1958 aa13□□□□□ -0.33
TPM1-230ENST00000561266 RGS16O15492 202 aaPredicted RBP12.99□□□□□ -0.33
TPM1-230ENST00000561266 PRKNO60260 465 aaPredicted RBP12.99□□□□□ -0.33
TPM1-230ENST00000561266 TRIM13O60858 407 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 SORBS2O94875 1100 aaKnown RBP12.99□□□□□ -0.33
TPM1-230ENST00000561266 SEMA3DO95025 777 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 MLYCDO95822 493 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 AIFM1O95831 613 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 TUBBP07437 444 aa12.99□□□□□ -0.33
TPM1-230ENST00000561266 CHRNGP07510 517 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms