RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 KCNJ13O60928 360 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 POP7O75817 140 aaKnown RBP3.47□□□□□ -1.85
HERC1-211ENST00000560983 CDK14O94921 469 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 FESP07332 822 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 ICAM2P13598 275 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 KRT5P13647 590 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 HLA-DPA1P20036 260 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 CYLC1P35663 651 aaPredicted RBP3.47□□□□□ -1.85
HERC1-211ENST00000560983 RFC3P40938 356 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 VSX2P58304 361 aaPredicted RBP3.47□□□□□ -1.85
HERC1-211ENST00000560983 EEF1A2Q05639 463 aaKnown RBP3.47□□□□□ -1.85
HERC1-211ENST00000560983 PRKAA1Q13131 559 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 NFE2L1Q14494 772 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 RFTN1Q14699 578 aaPredicted RBP3.47□□□□□ -1.85
HERC1-211ENST00000560983 IQCB1Q15051 598 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 MAPKAPK3Q16644 382 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 CLEC12BQ2HXU8 276 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 C15orf59Q2T9L4 293 aaPredicted RBP3.47□□□□□ -1.85
HERC1-211ENST00000560983 C2CD6Q53TS8 623 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 ARMC12Q5T9G4 340 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 LIPNQ5VXI9 398 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 ACAD10Q6JQN1 1059 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 TTI2Q6NXR4 508 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 CNSTQ6PJW8 725 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 KDELC1Q6UW63 502 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 UNC5DQ6UXZ4 953 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 B3GNT6Q6ZMB0 384 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 ARCQ7LC44 396 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 AMZ2Q86W34 360 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 CRLF3Q8IUI8 442 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 PRSS58Q8IYP2 241 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 ADGRF3Q8IZF5 1079 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 EMC1Q8N766 993 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 ARIH2OSQ8N7S6 290 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 TMEM178AQ8NBL3 297 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 NAXEQ8NCW5 288 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 GPR26Q8NDV2 337 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 FLVCR1-AS1Q8TAF5 88 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 SLC22A8Q8TCC7 542 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 GLYATL1Q969I3 302 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 KIAA1191Q96A73 305 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 COQ8BQ96D53 544 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 ZBED6CLQ96FA7 236 aaPredicted RBP3.47□□□□□ -1.85
HERC1-211ENST00000560983 PAGE5Q96GU1 130 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 ZNF354BQ96LW1 612 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 DACH2Q96NX9 599 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 SNX18Q96RF0 628 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 LYSMD1Q96S90 227 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 EIF3CQ99613 913 aaKnown RBP3.47□□□□□ -1.85
HERC1-211ENST00000560983 UTP23Q9BRU9 249 aaKnown RBP3.47□□□□□ -1.85
HERC1-211ENST00000560983 THAP2Q9H0W7 228 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 ZNF696Q9H7X3 374 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 GLOD4Q9HC38 313 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 TCF7L1Q9HCS4 588 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 IMP3Q9NV31 184 aaKnown RBP3.47□□□□□ -1.85
HERC1-211ENST00000560983 EURLQ9NYK6 297 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 TEKT2Q9UIF3 430 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 MAU2Q9Y6X3 613 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 PCLOQ9Y6V0 5065 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 HERC2O95714 4834 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 USF3Q68DE3 2245 aa3.47□□□□□ -1.85
HERC1-211ENST00000560983 GTPBP10A4D1E9 387 aaKnown RBP3.46□□□□□ -1.86
HERC1-211ENST00000560983 DEFB108AA8MXU0 73 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 POC1B-GALNT4F8VUJ3 575 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 DSCR3O14972 297 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 SHOX2O60902 331 aaPredicted RBP3.46□□□□□ -1.86
HERC1-211ENST00000560983 CHRM5P08912 532 aaPredicted RBP3.46□□□□□ -1.86
HERC1-211ENST00000560983 EPB41P11171 864 aaKnown RBP3.46□□□□□ -1.86
HERC1-211ENST00000560983 MCM3P25205 808 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 FMO5P49326 533 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 ASCL1P50553 236 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 RENBPP51606 427 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 ARSFP54793 590 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 EMP2P54851 167 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 WNT3P56703 355 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 MAXP61244 160 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 IL10RBQ08334 325 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 TMEM115Q12893 351 aaPredicted RBP3.46□□□□□ -1.86
HERC1-211ENST00000560983 XRCC4Q13426 336 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 GTF2H3Q13889 308 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 E2F2Q14209 437 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 TWIST1Q15672 202 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 CDO1Q16878 200 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 RIPPLY2Q5TAB7 128 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 RGS7BPQ6MZT1 257 aaPredicted RBP3.46□□□□□ -1.86
HERC1-211ENST00000560983 SPESP1Q6UW49 350 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 TMEM205Q6UW68 189 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 DNM1P46Q6ZS02 220 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 STRADAQ7RTN6 431 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 NLRP9Q7RTR0 991 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 TRIM73Q86UV7 250 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 GALNT4Q8N4A0 578 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 METTL27Q8N6F8 245 aaPredicted RBP3.46□□□□□ -1.86
HERC1-211ENST00000560983 C3orf56Q8N813 242 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 PNLDC1Q8NA58 520 aaKnown RBP3.46□□□□□ -1.86
HERC1-211ENST00000560983 POGLUT1Q8NBL1 392 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 ZNF398Q8TD17 642 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 GPT2Q8TD30 523 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 LCN9Q8WX39 176 aa3.46□□□□□ -1.86
HERC1-211ENST00000560983 RXFP2Q8WXD0 754 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms