RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 UAP1Q16222 522 aaPredicted RBP9.16□□□□□ -0.94
TPM1-225ENST00000560679 ZNF750Q32MQ0 723 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 FBXW10Q5XX13 1052 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 MRNIPQ6NTE8 343 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 ZNF549Q6P9A3 640 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 ZDHHC24Q6UX98 284 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 SYDE1Q6ZW31 735 aaPredicted RBP9.16□□□□□ -0.94
TPM1-225ENST00000560679 UBE2R2Q712K3 238 aaPredicted RBP9.16□□□□□ -0.94
TPM1-225ENST00000560679 CILP2Q8IUL8 1156 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 ULK2Q8IYT8 1036 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 CA13Q8N1Q1 262 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 SIMC1Q8NDZ2 872 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 ABHD11Q8NFV4 315 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 TNIP2Q8NFZ5 429 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 FAM76AQ8TAV0 307 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 LINC01560Q8TB33 94 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 CD200R1Q8TD46 325 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 UTP15Q8TED0 518 aaKnown RBP9.16□□□□□ -0.94
TPM1-225ENST00000560679 GRK7Q8WTQ7 553 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 ASB15Q8WXK1 588 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 SARAFQ96BY9 339 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 ZBTB9Q96C00 473 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 FMO2Q99518 471 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 KIFC1Q9BW19 673 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 TRIM31Q9BZY9 425 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 IL22Q9GZX6 179 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 ZNF703Q9H7S9 590 aaPredicted RBP9.16□□□□□ -0.94
TPM1-225ENST00000560679 HOMER3Q9NSC5 361 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 SYBUQ9NX95 663 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 TUBA8Q9NY65 449 aaPredicted RBP9.16□□□□□ -0.94
TPM1-225ENST00000560679 GRHL1Q9NZI5 618 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 ADAMTS6Q9UKP5 1117 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 ARID1AO14497 2285 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 TRGV5A0A0B4J1U4 118 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 TRIM64A6NGJ6 449 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 TRIM64BA6NI03 449 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 WWP2O00308 870 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 SMAD7O15105 426 aaKnown RBP9.15□□□□□ -0.94
TPM1-225ENST00000560679 OR1F1O43749 312 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 HCN1O60741 890 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 ZSCAN5DPP0CG00 497 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 SMIM10L1P0DMW3 83 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 RNH1P13489 461 aaKnown RBP9.15□□□□□ -0.94
TPM1-225ENST00000560679 ENO3P13929 434 aaPredicted RBP9.15□□□□□ -0.94
TPM1-225ENST00000560679 GABRA1P14867 456 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 CNR1P21554 472 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 MGAT1P26572 445 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 CEACAM8P31997 349 aaPredicted RBP9.15□□□□□ -0.94
TPM1-225ENST00000560679 RPL21P46778 160 aaKnown RBP9.15□□□□□ -0.94
TPM1-225ENST00000560679 ZNF136P52737 540 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 HK2P52789 917 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 RAB8AP61006 207 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 POU4F3Q15319 338 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 TTLL9Q3SXZ7 439 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 ACSF3Q4G176 576 aaPredicted RBP9.15□□□□□ -0.94
TPM1-225ENST00000560679 TTMPQ5BVD1 217 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 KIAA0930Q6ICG6 404 aaPredicted RBP9.15□□□□□ -0.94
TPM1-225ENST00000560679 ADGRD1Q6QNK2 874 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 AGTRAPQ6RW13 159 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 LCTLQ6UWM7 567 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 RTL4Q6ZR62 310 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 SDCCAG8Q86SQ7 713 aaPredicted RBP9.15□□□□□ -0.94
TPM1-225ENST00000560679 CPNE9Q8IYJ1 553 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 TMEM52Q8NDY8 209 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 OR4K1Q8NGD4 311 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 C1orf54Q8WWF1 131 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 KCNJ9Q92806 393 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 ARL8AQ96BM9 186 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 SMIM10Q96HG1 83 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 PKNOX2Q96KN3 472 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 Q96MF0 132 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 OR4K3Q96R72 315 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 TCF12Q99081 682 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 CCDC77Q9BR77 488 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 TXLNGYQ9BZA5 131 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 PCBD2Q9H0N5 130 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 RHBGQ9H310 441 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 EIF2B3Q9NR50 452 aaKnown RBP9.15□□□□□ -0.94
TPM1-225ENST00000560679 PNO1Q9NRX1 252 aaKnown RBP9.15□□□□□ -0.94
TPM1-225ENST00000560679 ALKBH4Q9NXW9 302 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 KLHL42Q9P2K6 505 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 MYOTQ9UBF9 498 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 MTRF1LQ9UGC7 380 aaKnown RBP9.15□□□□□ -0.94
TPM1-225ENST00000560679 TRPS1Q9UHF7 1281 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 PDE10AQ9Y233 779 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 SNX24Q9Y343 169 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 ATG4BQ9Y4P1 393 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 MMACHCQ9Y4U1 282 aa9.15□□□□□ -0.94
TPM1-225ENST00000560679 TRBC2A0A5B9 178 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 TUBAL3A6NHL2 446 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 GOLGA6L10A6NI86 522 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 LRRC3CA6NJW4 275 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 DVL2O14641 736 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 ZBTB14O43829 449 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 ZFAND5O76080 213 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 GOSR1O95249 250 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 SERPIND1P05546 499 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 RFPL3SP0C7P2 107 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 NPPBP16860 134 aa9.14□□□□□ -0.95
TPM1-225ENST00000560679 STIP1P31948 543 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms