RNA–Protein interactions for RNA: ENST00000560637.5

VPS13C-209, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 1 (best)

Gene VPS13C, Length 3,684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-209ENST00000560637 TPT1P8Q9HAU6 139 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 DMRT3Q9NQL9 472 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 SEMA4GQ9NTN9 838 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 ADPRHL2Q9NX46 363 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 TRPS1Q9UHF7 1281 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 GTF2A1LQ9UNN4 478 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 TESMINQ9Y4I5 508 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 PIKFYVEQ9Y2I7 2098 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 MYO18BQ8IUG5 2567 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 TNFRSF10CO14798 259 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 CHST10O43529 356 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 PCDHGA12O60330 932 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 TRAPPC6AO75865 159 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 TGDSO95455 350 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 KRT75O95678 551 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 UBTFL6P0CB48 400 aaPredicted RBP5.18□□□□□ -1.58
VPS13C-209ENST00000560637 SP9P0CG40 484 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 OR12D1P0DN82 309 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 SDC1P18827 310 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 TCN2P20062 427 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 TNFRSF1BP20333 461 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 MAOAP21397 527 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 MC3RP41968 323 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 ABATP80404 500 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 LTB4RQ15722 352 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 GSTA3Q16772 222 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 FAM98BQ52LJ0 330 aaKnown RBP5.18□□□□□ -1.58
VPS13C-209ENST00000560637 BHLHB9Q6PI77 547 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 ZBTB49Q6ZSB9 765 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 RAB11FIP2Q7L804 512 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 PRSS41Q7RTY9 318 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 VN1R5Q7Z5H4 357 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 LINC01555Q8NAE3 123 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 CEP76Q8TAP6 659 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 STARD8Q92502 1023 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 MAPKAP1Q9BPZ7 522 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 ALOXE3Q9BYJ1 711 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 SMOXQ9NWM0 555 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 EURLQ9NYK6 297 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 SPATA7Q9P0W8 599 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 SH3BGRL2Q9UJC5 107 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 ZNF232Q9UNY5 417 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 PLCL2Q9UPR0 1127 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 LYVE1Q9Y5Y7 322 aa5.18□□□□□ -1.58
VPS13C-209ENST00000560637 PCNX2A6NKB5 2137 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 IGHV5-51A0A0C4DH38 117 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 M0QX08 132 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 TNFRSF10AO00220 468 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 GSC2O15499 205 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 FRS3O43559 492 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 ETHE1O95571 254 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 SBK3P0C264 359 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 ETFAP13804 333 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 CAPN3P20807 821 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 GTF2E2P29084 291 aaKnown RBP5.17□□□□□ -1.58
VPS13C-209ENST00000560637 GABRA3P34903 492 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 ITGA1P56199 1179 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 RGS8P57771 180 aaPredicted RBP5.17□□□□□ -1.58
VPS13C-209ENST00000560637 RPS15P62841 145 aaKnown RBP5.17□□□□□ -1.58
VPS13C-209ENST00000560637 EMX2Q04743 252 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 EPS8Q12929 822 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 SPRED3Q2MJR0 410 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 GRHL2Q6ISB3 625 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 CGB2Q6NT52 195 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 Q6ZSR9 355 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 PIGWQ7Z7B1 504 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 GALNT5Q7Z7M9 940 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 OR2A1Q8NGT9 310 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 OR2L8Q8NGY9 312 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 NFKBIDQ8NI38 313 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 MAGEE2Q8TD90 523 aaPredicted RBP5.17□□□□□ -1.58
VPS13C-209ENST00000560637 C16orf78Q8WTQ4 265 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 CGREF1Q99674 301 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 SIKE1Q9BRV8 207 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.17□□□□□ -1.58
VPS13C-209ENST00000560637 RIBC2Q9H4K1 309 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 REEP4Q9H6H4 257 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 FAM60AQ9NP50 221 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 CUTCQ9NTM9 273 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 EXD2Q9NVH0 621 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 DNAAF2Q9NVR5 837 aaKnown RBP5.17□□□□□ -1.58
VPS13C-209ENST00000560637 NLGN3Q9NZ94 848 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 LUZP4Q9P127 313 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 ERVK-19Q9WJR5 959 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 PRSS51A0A1B0GVH4 220 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 ELOVL7A1L3X0 281 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 FAM234BA2RU67 622 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 A6NCN8 305 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 GPR89AB7ZAQ6 455 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 WWP2O00308 870 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 OR10H3O60404 316 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 SOX30O94993 753 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 ALDOCP09972 364 aaKnown RBP5.17□□□□□ -1.58
VPS13C-209ENST00000560637 GPR89BP0CG08 455 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 DHRS4L1P0CG22 281 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 CCL4P13236 92 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 EPHA8P29322 1005 aaPredicted RBP5.17□□□□□ -1.58
VPS13C-209ENST00000560637 RPL3P39023 403 aaKnown RBP5.17□□□□□ -1.58
VPS13C-209ENST00000560637 EMP2P54851 167 aa5.17□□□□□ -1.58
VPS13C-209ENST00000560637 HSD11B2P80365 405 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms