RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 MIB1Q86YT6 1006 aa18.35■□□□□ 0.53
SEMA4B-215ENST00000560089 DENND6BQ8NEG7 585 aa18.35■□□□□ 0.53
SEMA4B-215ENST00000560089 SPATA22Q8NHS9 363 aa18.35■□□□□ 0.53
SEMA4B-215ENST00000560089 SH3RF2Q8TEC5 729 aa18.35■□□□□ 0.53
SEMA4B-215ENST00000560089 AP3S1Q92572 193 aa18.35■□□□□ 0.53
SEMA4B-215ENST00000560089 SCMH1Q96GD3 660 aa18.35■□□□□ 0.53
SEMA4B-215ENST00000560089 SLC38A3Q99624 504 aa18.35■□□□□ 0.53
SEMA4B-215ENST00000560089 PKMYT1Q99640 499 aa18.35■□□□□ 0.53
SEMA4B-215ENST00000560089 APOL5Q9BWW9 433 aa18.35■□□□□ 0.53
SEMA4B-215ENST00000560089 GPN3Q9UHW5 284 aaPredicted RBP18.35■□□□□ 0.53
SEMA4B-215ENST00000560089 POLR3HQ9Y535 204 aaPredicted RBP18.35■□□□□ 0.53
SEMA4B-215ENST00000560089 S100A9P06702 114 aaKnown RBP18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 ASGR1P07306 291 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 CKMT1AP12532 417 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 KCNA10Q16322 511 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 HFEQ30201 348 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 VASNQ6EMK4 673 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 KIAA0930Q6ICG6 404 aaPredicted RBP18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 ZNF425Q6IV72 752 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 PDZD4Q76G19 769 aaPredicted RBP18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 PDZD3Q86UT5 571 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 OR1M1Q8NGA1 313 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 CINPQ9BW66 212 aaPredicted RBP18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 STARD7Q9NQZ5 370 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 HEBP1Q9NRV9 189 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 LACTBL1A8MY62 500 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 SUPT3HB4E1H0 165 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 H2AFB1P0C5Y9 115 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 H2AFB2P0C5Z0 115 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 SLC6A1P30531 599 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 PBX3P40426 434 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 KIAA1024LP59773 190 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 ERVK-25P63136 954 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 GPR176Q14439 515 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 ANKS6Q68DC2 871 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 GDF6Q6KF10 455 aaPredicted RBP18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 HSD17B13Q7Z5P4 300 aaPredicted RBP18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 STX12Q86Y82 276 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 C10orf111Q8N326 155 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 LIX1Q8N485 282 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 NKX6-2Q9C056 277 aaPredicted RBP18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 HDHD2Q9H0R4 259 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 RPF1Q9H9Y2 349 aaKnown RBP18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 ARNT2Q9HBZ2 717 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 NIT2Q9NQR4 276 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 DLL4Q9NR61 685 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 POMT2Q9UKY4 750 aa18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 EXO1Q9UQ84 846 aaKnown RBP18.34■□□□□ 0.53
SEMA4B-215ENST00000560089 MBLAC1A4D2B0 266 aaPredicted RBP18.33■□□□□ 0.53
SEMA4B-215ENST00000560089 DCLK1O15075 740 aa18.33■□□□□ 0.53
SEMA4B-215ENST00000560089 OR1I1O60431 355 aa18.33■□□□□ 0.53
SEMA4B-215ENST00000560089 ATG12O94817 140 aa18.33■□□□□ 0.53
SEMA4B-215ENST00000560089 LCN1P31025 176 aa18.33■□□□□ 0.53
SEMA4B-215ENST00000560089 RBBP7Q16576 425 aa18.33■□□□□ 0.53
SEMA4B-215ENST00000560089 ZER1Q7Z7L7 766 aa18.33■□□□□ 0.53
SEMA4B-215ENST00000560089 PGAP3Q96FM1 320 aaPredicted RBP18.33■□□□□ 0.53
SEMA4B-215ENST00000560089 GPR160Q9UJ42 338 aa18.33■□□□□ 0.53
SEMA4B-215ENST00000560089 SCP2D1Q9UJQ7 156 aa18.33■□□□□ 0.53
SEMA4B-215ENST00000560089 SMIM6P0DI80 62 aa18.33■□□□□ 0.52
SEMA4B-215ENST00000560089 GABRB1P18505 474 aa18.33■□□□□ 0.52
SEMA4B-215ENST00000560089 C4BPBP20851 252 aa18.33■□□□□ 0.52
SEMA4B-215ENST00000560089 PTAFRP25105 342 aa18.33■□□□□ 0.52
SEMA4B-215ENST00000560089 HOXA11P31270 313 aaPredicted RBP18.33■□□□□ 0.52
SEMA4B-215ENST00000560089 PLAG1Q6DJT9 500 aa18.33■□□□□ 0.52
SEMA4B-215ENST00000560089 C22orf42Q6IC83 251 aa18.33■□□□□ 0.52
SEMA4B-215ENST00000560089 OR9Q1Q8NGQ5 310 aa18.33■□□□□ 0.52
SEMA4B-215ENST00000560089 MOSPD2Q8NHP6 518 aa18.33■□□□□ 0.52
SEMA4B-215ENST00000560089 GANCQ8TET4 914 aa18.33■□□□□ 0.52
SEMA4B-215ENST00000560089 ZNF296Q8WUU4 475 aaPredicted RBP18.33■□□□□ 0.52
SEMA4B-215ENST00000560089 MNTQ99583 582 aa18.33■□□□□ 0.52
SEMA4B-215ENST00000560089 MED18Q9BUE0 208 aa18.33■□□□□ 0.52
SEMA4B-215ENST00000560089 FICDQ9BVA6 458 aa18.33■□□□□ 0.52
SEMA4B-215ENST00000560089 NFKBIZQ9BYH8 718 aa18.33■□□□□ 0.52
SEMA4B-215ENST00000560089 DNTTIP1Q9H147 329 aa18.33■□□□□ 0.52
SEMA4B-215ENST00000560089 EVA1AQ9H8M9 152 aa18.33■□□□□ 0.52
SEMA4B-215ENST00000560089 TREX1Q9NSU2 369 aa18.33■□□□□ 0.52
SEMA4B-215ENST00000560089 TXNL4BQ9NX01 149 aaKnown RBP18.33■□□□□ 0.52
SEMA4B-215ENST00000560089 ESR1P03372 595 aa18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 ACADLP28330 430 aa18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 MAZP56270 477 aaKnown RBP18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 FAM174BQ3ZCQ3 159 aa18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 ATG9BQ674R7 924 aa18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 VTCN1Q7Z7D3 282 aa18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 LDB1Q86U70 411 aaPredicted RBP18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 MCATQ8IVS2 390 aaKnown RBP18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 FBXO39Q8N4B4 442 aa18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 OR2T35Q8NGX2 323 aa18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 SLC22A11Q9NSA0 550 aa18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 NUDT15Q9NV35 164 aa18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 LOC105369274A0A096LPK9 316 aa18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 SMIM35A0A1B0GVV1 85 aa18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 PSMD3O43242 534 aa18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 ADAMTS4O75173 837 aa18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 MT-CYBP00156 380 aaPredicted RBP18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 ACLYP53396 1101 aa18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 TSNQ15631 228 aaKnown RBP18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 NOTUMQ6P988 496 aa18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 Q6ZSR9 355 aa18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 OR4N4Q8N0Y3 316 aa18.32■□□□□ 0.52
SEMA4B-215ENST00000560089 ELP4Q96EB1 424 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms