RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 FAM186AA6NE01 2351 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 A0A0A6YYC8 382 aaPredicted RBP4.94□□□□□ -1.62
SPG11-220ENST00000559933 TEX51A0A1B0GUA7 166 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 OR2W5A6NFC9 320 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 ANKDD1BA6NHY2 528 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 TRPC5OSA6NMA1 111 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 H3BMH7 237 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 I3L1I5 382 aaPredicted RBP4.94□□□□□ -1.62
SPG11-220ENST00000559933 SGK494L7N484 410 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 SLC28A1O00337 649 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 FCHO1O14526 889 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 RGS14O43566 566 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 AKAP10O43572 662 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 PCDH7O60245 1069 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 CSO75390 466 aaKnown RBP4.94□□□□□ -1.62
SPG11-220ENST00000559933 SEC22BO75396 215 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 RDH16O75452 317 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 ZBTB11O95625 1053 aaPredicted RBP4.94□□□□□ -1.62
SPG11-220ENST00000559933 KLK1P06870 262 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 G6PDP11413 515 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 BCKDHAP12694 445 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 NELFEP18615 380 aaKnown RBP4.94□□□□□ -1.62
SPG11-220ENST00000559933 ITGAXP20702 1163 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 TPP2P29144 1249 aaPredicted RBP4.94□□□□□ -1.62
SPG11-220ENST00000559933 BSGP35613 385 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 GRK3P35626 688 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 SSR2P43308 183 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 ZFP36L2P47974 494 aaKnown RBP4.94□□□□□ -1.62
SPG11-220ENST00000559933 CPA2P48052 419 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 NOVA1P51513 510 aaKnown RBP4.94□□□□□ -1.62
SPG11-220ENST00000559933 RAP1GDS1P52306 607 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 HNRNPFP52597 415 aaKnown RBP4.94□□□□□ -1.62
SPG11-220ENST00000559933 HNRNPH2P55795 449 aaKnown RBP4.94□□□□□ -1.62
SPG11-220ENST00000559933 UFM1P61960 85 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 RPS15AP62244 130 aaKnown RBP4.94□□□□□ -1.62
SPG11-220ENST00000559933 BTN3A2P78410 334 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 SIM1P81133 766 aaPredicted RBP4.94□□□□□ -1.62
SPG11-220ENST00000559933 MC1RQ01726 317 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 ZFP36L1Q07352 338 aaKnown RBP4.94□□□□□ -1.62
SPG11-220ENST00000559933 FOXM1Q08050 763 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 CSTF3Q12996 717 aaKnown RBP4.94□□□□□ -1.62
SPG11-220ENST00000559933 LAPTM5Q13571 262 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 PTGR1Q14914 329 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 KIAA0040Q15053 153 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 TERF2Q15554 542 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 TRIP6Q15654 476 aaKnown RBP4.94□□□□□ -1.62
SPG11-220ENST00000559933 AP5B1Q2VPB7 878 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 PRTGQ2VWP7 1150 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 ZNF750Q32MQ0 723 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 DEFB134Q4QY38 66 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 ATP6AP1LQ52LC2 224 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 WASHC2DQ5SRD0 308 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 GKAP1Q5VSY0 366 aaPredicted RBP4.94□□□□□ -1.62
SPG11-220ENST00000559933 FAM69BQ5VUD6 431 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 IL23RQ5VWK5 629 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 LCN10Q6JVE6 187 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 KLHL35Q6PF15 583 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 CYP20A1Q6UW02 462 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 BNC2Q6ZN30 1099 aaPredicted RBP4.94□□□□□ -1.62
SPG11-220ENST00000559933 RBM44Q6ZP01 1051 aaKnown RBP4.94□□□□□ -1.62
SPG11-220ENST00000559933 ARHGAP22Q7Z5H3 698 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 MTDHQ86UE4 582 aaKnown RBP4.94□□□□□ -1.62
SPG11-220ENST00000559933 ZFAND4Q86XD8 727 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 CACNA2D3Q8IZS8 1091 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 D2HGDHQ8N465 521 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 AFAP1L2Q8N4X5 818 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 FAM47BQ8NA70 645 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 CCDC197Q8NCU1 140 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 TMEM52Q8NDY8 209 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 OR6C4Q8NGE1 309 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 OR9A4Q8NGU2 314 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 NT5CQ8TCD5 201 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 UTP15Q8TED0 518 aaKnown RBP4.94□□□□□ -1.62
SPG11-220ENST00000559933 DOK4Q8TEW6 326 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 CHTF18Q8WVB6 975 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 KLHL6Q8WZ60 621 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 RERGQ96A58 199 aaPredicted RBP4.94□□□□□ -1.62
SPG11-220ENST00000559933 ZNF501Q96CX3 271 aaPredicted RBP4.94□□□□□ -1.62
SPG11-220ENST00000559933 ERP27Q96DN0 273 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 MS4A6EQ96DS6 147 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 TM4SF19Q96DZ7 209 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 CMTM7Q96FZ5 175 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 TCTN2Q96GX1 697 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 FAR2Q96K12 515 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 EGLN2Q96KS0 407 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 OR6C1Q96RD1 312 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 CSF3RQ99062 836 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 RSRP1Q9BUV0 290 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 REXO4Q9GZR2 422 aaKnown RBP4.94□□□□□ -1.62
SPG11-220ENST00000559933 RAB33BQ9H082 229 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 IRF2BPLQ9H1B7 796 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 RHBGQ9H310 441 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 ACTL8Q9H568 366 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 ZNF385DQ9H6B1 395 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 NT5DC2Q9H857 520 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 PDE7BQ9NP56 450 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 RIC8BQ9NVN3 520 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 AIG1Q9NVV5 245 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 C1orf109Q9NX04 203 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 TEX10Q9NXF1 929 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms