RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 CSF3RQ99062 836 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 PRPF18Q99633 342 aaKnown RBP9.86□□□□□ -0.83
TPM1-221ENST00000559831 RTKNQ9BST9 563 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 CLMPQ9H6B4 373 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 REEP4Q9H6H4 257 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 ZNF304Q9HCX3 659 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 LYRM4Q9HD34 91 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 MIEF1Q9NQG6 463 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 ENAMQ9NRM1 1142 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 C5AR2Q9P296 337 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 MAPRE3Q9UPY8 281 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 TMEM184BQ9Y519 407 aaPredicted RBP9.86□□□□□ -0.83
TPM1-221ENST00000559831 PCDHB3Q9Y5E6 796 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 B3GALT1Q9Y5Z6 326 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 ZNF292O60281 2723 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 KNTC1P50748 2209 aa9.86□□□□□ -0.83
TPM1-221ENST00000559831 NUP214P35658 2090 aaPredicted RBP9.86□□□□□ -0.83
TPM1-221ENST00000559831 CEP250Q9BV73 2442 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 A0A1W2PNU3 283 aaPredicted RBP9.85□□□□□ -0.83
TPM1-221ENST00000559831 C1orf226A1L170 272 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 CCDC154A6NI56 674 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 GABRR3A8MPY1 467 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 FAM227AF5H4B4 570 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 H0YIG0 161 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 ANGPT2O15123 496 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 PROM1O43490 865 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 CPNE3O75131 537 aaKnown RBP9.85□□□□□ -0.83
TPM1-221ENST00000559831 SNRPB2P08579 225 aaKnown RBP9.85□□□□□ -0.83
TPM1-221ENST00000559831 FURINP09958 794 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 PIM1P11309 404 aaPredicted RBP9.85□□□□□ -0.83
TPM1-221ENST00000559831 DRD2P14416 443 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 PCSK2P16519 638 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 ITGAXP20702 1163 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 DDCP20711 480 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 CAPN3P20807 821 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 SDHBP21912 280 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 TLX1P31314 330 aaPredicted RBP9.85□□□□□ -0.83
TPM1-221ENST00000559831 RPL3P39023 403 aaKnown RBP9.85□□□□□ -0.83
TPM1-221ENST00000559831 ZFP36L2P47974 494 aaKnown RBP9.85□□□□□ -0.83
TPM1-221ENST00000559831 CPA2P48052 419 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 ACTN3Q08043 901 aaPredicted RBP9.85□□□□□ -0.83
TPM1-221ENST00000559831 KRT72Q14CN4 511 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 MMEL1Q495T6 779 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 VPS26BQ4G0F5 336 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 ZNF385BQ569K4 471 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 FAM91A1Q658Y4 838 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 OR4F3Q6IEY1 312 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 PRMT9Q6P2P2 845 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 BLOC1S3Q6QNY0 202 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 CCDC121Q6ZUS5 278 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 RIMKLAQ8IXN7 391 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 SLC38A9Q8NBW4 561 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.85□□□□□ -0.83
TPM1-221ENST00000559831 ADAMTS14Q8WXS8 1223 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 VPS33AQ96AX1 596 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 KLHL29Q96CT2 875 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 CMTM5Q96DZ9 223 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 MVB12AQ96EY5 273 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 NSL1Q96IY1 281 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 SLC25A23Q9BV35 468 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 DUSP26Q9BV47 211 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 ULBP3Q9BZM4 244 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 WDR41Q9HAD4 459 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 MS4A12Q9NXJ0 267 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 DLL3Q9NYJ7 618 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 KCMF1Q9P0J7 381 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 TRPC4Q9UBN4 977 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 ATP6V1HQ9UI12 483 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 TAGLN3Q9UI15 199 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 EXO1Q9UQ84 846 aaKnown RBP9.85□□□□□ -0.83
TPM1-221ENST00000559831 WBP11Q9Y2W2 641 aaKnown RBP9.85□□□□□ -0.83
TPM1-221ENST00000559831 PCDHA9Q9Y5H5 950 aa9.85□□□□□ -0.83
TPM1-221ENST00000559831 SDK2Q58EX2 2172 aa9.84□□□□□ -0.83
TPM1-221ENST00000559831 WDR87Q6ZQQ6 2873 aa9.84□□□□□ -0.83
TPM1-221ENST00000559831 ERICH4A6NGS2 130 aa9.84□□□□□ -0.83
TPM1-221ENST00000559831 WASHC1A8K0Z3 465 aa9.84□□□□□ -0.83
TPM1-221ENST00000559831 PGRMC2O15173 223 aa9.84□□□□□ -0.83
TPM1-221ENST00000559831 CFLARO15519 480 aa9.84□□□□□ -0.83
TPM1-221ENST00000559831 B4GALT2O60909 372 aa9.84□□□□□ -0.83
TPM1-221ENST00000559831 ERAL1O75616 437 aaKnown RBP9.84□□□□□ -0.83
TPM1-221ENST00000559831 CDC123O75794 336 aaPredicted RBP9.84□□□□□ -0.83
TPM1-221ENST00000559831 IL6P05231 212 aa9.84□□□□□ -0.83
TPM1-221ENST00000559831 LAMP1P11279 417 aa9.84□□□□□ -0.83
TPM1-221ENST00000559831 ESRRAP11474 423 aaPredicted RBP9.84□□□□□ -0.83
TPM1-221ENST00000559831 DDX5P17844 614 aaKnown RBP9.84□□□□□ -0.83
TPM1-221ENST00000559831 EFNA1P20827 205 aaPredicted RBP9.84□□□□□ -0.83
TPM1-221ENST00000559831 PRDX6P30041 224 aa9.84□□□□□ -0.83
TPM1-221ENST00000559831 KIR3DL1P43629 444 aa9.84□□□□□ -0.83
TPM1-221ENST00000559831 XCR1P46094 333 aa9.84□□□□□ -0.83
TPM1-221ENST00000559831 HNRNPFP52597 415 aaKnown RBP9.84□□□□□ -0.83
TPM1-221ENST00000559831 C21orf58P58505 322 aa9.84□□□□□ -0.83
TPM1-221ENST00000559831 DCDP81605 110 aaKnown RBP9.84□□□□□ -0.83
TPM1-221ENST00000559831 PLIN5Q00G26 463 aa9.84□□□□□ -0.83
TPM1-221ENST00000559831 SRSF11Q05519 484 aaKnown RBP9.84□□□□□ -0.83
TPM1-221ENST00000559831 ABHD18Q0P651 414 aa9.84□□□□□ -0.83
TPM1-221ENST00000559831 DSG2Q14126 1118 aa9.84□□□□□ -0.83
TPM1-221ENST00000559831 RCAN2Q14206 197 aa9.84□□□□□ -0.83
TPM1-221ENST00000559831 ERV3-1Q14264 604 aa9.84□□□□□ -0.83
TPM1-221ENST00000559831 PRSS53Q2L4Q9 553 aa9.84□□□□□ -0.83
TPM1-221ENST00000559831 DPY19L1Q2PZI1 675 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms