RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 PXNP49023 591 aaPredicted RBP9.57□□□□□ -0.88
LRRC28-216ENST00000559819 ST3GAL4Q11206 333 aa9.57□□□□□ -0.88
LRRC28-216ENST00000559819 HSPB3Q12988 150 aa9.57□□□□□ -0.88
LRRC28-216ENST00000559819 CAMK1Q14012 370 aa9.57□□□□□ -0.88
LRRC28-216ENST00000559819 PTGES3Q15185 160 aaKnown RBP9.57□□□□□ -0.88
LRRC28-216ENST00000559819 TBCEQ15813 527 aaPredicted RBP9.57□□□□□ -0.88
LRRC28-216ENST00000559819 HNRNPA1L2Q32P51 320 aaKnown RBP9.57□□□□□ -0.88
LRRC28-216ENST00000559819 INAVAQ3KP66 663 aa9.57□□□□□ -0.88
LRRC28-216ENST00000559819 COLEC12Q5KU26 742 aa9.57□□□□□ -0.88
LRRC28-216ENST00000559819 KLHL17Q6TDP4 642 aa9.57□□□□□ -0.88
LRRC28-216ENST00000559819 RBM45Q8IUH3 476 aaKnown RBP9.57□□□□□ -0.88
LRRC28-216ENST00000559819 AMER3Q8N944 861 aa9.57□□□□□ -0.88
LRRC28-216ENST00000559819 B3GNT7Q8NFL0 401 aa9.57□□□□□ -0.88
LRRC28-216ENST00000559819 WFIKKN2Q8TEU8 576 aa9.57□□□□□ -0.88
LRRC28-216ENST00000559819 LINC00615Q96LM1 132 aaPredicted RBP9.57□□□□□ -0.88
LRRC28-216ENST00000559819 WFDC6Q9BQY6 131 aa9.57□□□□□ -0.88
LRRC28-216ENST00000559819 NLNQ9BYT8 704 aa9.57□□□□□ -0.88
LRRC28-216ENST00000559819 ZNF556Q9HAH1 456 aa9.57□□□□□ -0.88
LRRC28-216ENST00000559819 NMNAT1Q9HAN9 279 aaPredicted RBP9.57□□□□□ -0.88
LRRC28-216ENST00000559819 IL23AQ9NPF7 189 aa9.57□□□□□ -0.88
LRRC28-216ENST00000559819 IMPAD1Q9NX62 359 aa9.57□□□□□ -0.88
LRRC28-216ENST00000559819 CHCHD3Q9NX63 227 aaKnown RBP9.57□□□□□ -0.88
LRRC28-216ENST00000559819 FAM32AQ9Y421 112 aaKnown RBP9.57□□□□□ -0.88
LRRC28-216ENST00000559819 INSL6Q9Y581 213 aa9.57□□□□□ -0.88
LRRC28-216ENST00000559819 AP1M2Q9Y6Q5 423 aa9.57□□□□□ -0.88
LRRC28-216ENST00000559819 ENPP4Q9Y6X5 453 aa9.57□□□□□ -0.88
LRRC28-216ENST00000559819 ANKDD1BA6NHY2 528 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 HOXC11O43248 304 aaPredicted RBP9.56□□□□□ -0.88
LRRC28-216ENST00000559819 TLL1O43897 1013 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 ADH1CP00326 375 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 PORP16435 677 aaPredicted RBP9.56□□□□□ -0.88
LRRC28-216ENST00000559819 ITGA2P17301 1181 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 CBLP22681 906 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 CD40LGP29965 261 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 RPL3P39023 403 aaKnown RBP9.56□□□□□ -0.88
LRRC28-216ENST00000559819 CNTN1Q12860 1018 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 ZNF234Q14588 700 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 GAB4Q2WGN9 574 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 LCTLQ6UWM7 567 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 SLC46A3Q7Z3Q1 461 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 HMGN2P46Q86SG4 172 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 PDZD3Q86UT5 571 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 ARMC8Q8IUR7 673 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 ETFBKMTQ8IXQ9 262 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 CELF5Q8N6W0 485 aaKnown RBP9.56□□□□□ -0.88
LRRC28-216ENST00000559819 GPR32P1Q8NGA4 272 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 PSMA8Q8TAA3 256 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 VANGL1Q8TAA9 524 aaPredicted RBP9.56□□□□□ -0.88
LRRC28-216ENST00000559819 TFGQ92734 400 aaPredicted RBP9.56□□□□□ -0.88
LRRC28-216ENST00000559819 EXOSC8Q96B26 276 aaKnown RBP9.56□□□□□ -0.88
LRRC28-216ENST00000559819 TM4SF18Q96CE8 201 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 TMEM19Q96HH6 336 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 C11orf16Q9NQ32 467 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 HCN4Q9Y3Q4 1203 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 CHD7Q9P2D1 2997 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 CDH23Q9H251 3354 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 MTCL1Q9Y4B5 1905 aaKnown RBP9.56□□□□□ -0.88
LRRC28-216ENST00000559819 EDDM13A0A1B0GTR0 161 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 METTL15A6NJ78 407 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 WASHC1A8K0Z3 465 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 H7BY64 318 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 DSCR3O14972 297 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 KIAA0355O15063 1070 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 PPM1DO15297 605 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 SEMA7AO75326 666 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 SERPINB7O75635 380 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 SOX14O95416 240 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 CHMP24386 653 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 BSGP35613 385 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 FEN1P39748 380 aaKnown RBP9.56□□□□□ -0.88
LRRC28-216ENST00000559819 MAPK12P53778 367 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 MANFP55145 182 aaKnown RBP9.56□□□□□ -0.88
LRRC28-216ENST00000559819 CSNK2BP67870 215 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 ARMCX4Q5H9R4 360 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 KHDRBS2Q5VWX1 349 aaKnown RBP9.56□□□□□ -0.88
LRRC28-216ENST00000559819 WASH2PQ6VEQ5 465 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 ZNF765Q7L2R6 523 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 WDR53Q7Z5U6 358 aaPredicted RBP9.56□□□□□ -0.88
LRRC28-216ENST00000559819 C17orf64Q86WR6 236 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 HEATR4Q86WZ0 1026 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 TMIEQ8NEW7 156 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 OR4D11Q8NGI4 311 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 SETD7Q8WTS6 366 aaKnown RBP9.56□□□□□ -0.88
LRRC28-216ENST00000559819 SLC38A5Q8WUX1 472 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 RAD51AP1Q96B01 352 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 MTERF3Q96E29 417 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 OTUB1Q96FW1 271 aaPredicted RBP9.56□□□□□ -0.88
LRRC28-216ENST00000559819 DACH2Q96NX9 599 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 PRAP1Q96NZ9 151 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 OR5M11Q96RB7 305 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 CHCHD6Q9BRQ6 235 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 C6orf62Q9GZU0 229 aaPredicted RBP9.56□□□□□ -0.88
LRRC28-216ENST00000559819 DPEP2Q9H4A9 486 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 FTSJ1Q9UET6 329 aa9.56□□□□□ -0.88
LRRC28-216ENST00000559819 C17orf113A0A1B0GUU1 675 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 SH3BP5O60239 455 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 IFNW1P05000 195 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 DDCP20711 480 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 TGM1P22735 817 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 KELP23276 732 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms