RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 NUDT13Q86X67 352 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 ZNF595Q8IYB9 648 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 PPP1R14CQ8TAE6 165 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 MGARPQ8TDB4 240 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 WBP1Q96G27 269 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 UBL7Q96S82 380 aaPredicted RBP19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 ARHGAP9Q9BRR9 750 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 ZNF700Q9H0M5 742 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 ATP13A2Q9NQ11 1180 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 PRDM9Q9NQV7 894 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 PRTFDC1Q9NRG1 225 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 ADAM29Q9UKF5 820 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 FIS1Q9Y3D6 152 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 TRAF6Q9Y4K3 522 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 MMACHCQ9Y4U1 282 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 CLDN16Q9Y5I7 305 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 CNTRLQ7Z7A1 2325 aa19.06■□□□□ 0.64
TSPAN3-207ENST00000559494 IGKV3D-11A0A0A0MRZ8 115 aa19.05■□□□□ 0.64
TSPAN3-207ENST00000559494 IGHV1-45A0A0A0MS14 117 aa19.05■□□□□ 0.64
TSPAN3-207ENST00000559494 TGFBR3LH3BV60 316 aa19.05■□□□□ 0.64
TSPAN3-207ENST00000559494 PROM1O43490 865 aa19.05■□□□□ 0.64
TSPAN3-207ENST00000559494 LYPLA1O75608 230 aaPredicted RBP19.05■□□□□ 0.64
TSPAN3-207ENST00000559494 HPP00738 406 aa19.05■□□□□ 0.64
TSPAN3-207ENST00000559494 FAM58BPP0C7Q3 252 aa19.05■□□□□ 0.64
TSPAN3-207ENST00000559494 CPN2P22792 545 aa19.05■□□□□ 0.64
TSPAN3-207ENST00000559494 KANK2Q63ZY3 851 aa19.05■□□□□ 0.64
TSPAN3-207ENST00000559494 C18orf63Q68DL7 685 aa19.05■□□□□ 0.64
TSPAN3-207ENST00000559494 CYP20A1Q6UW02 462 aa19.05■□□□□ 0.64
TSPAN3-207ENST00000559494 SCUBE1Q8IWY4 988 aa19.05■□□□□ 0.64
TSPAN3-207ENST00000559494 CLYBLQ8N0X4 340 aa19.05■□□□□ 0.64
TSPAN3-207ENST00000559494 C1orf52Q8N6N3 182 aaKnown RBP19.05■□□□□ 0.64
TSPAN3-207ENST00000559494 APIPQ96GX9 242 aa19.05■□□□□ 0.64
TSPAN3-207ENST00000559494 VPS50Q96JG6 964 aa19.05■□□□□ 0.64
TSPAN3-207ENST00000559494 WDR77Q9BQA1 342 aaPredicted RBP19.05■□□□□ 0.64
TSPAN3-207ENST00000559494 C20orf27Q9GZN8 174 aa19.05■□□□□ 0.64
TSPAN3-207ENST00000559494 TUBB1Q9H4B7 451 aa19.05■□□□□ 0.64
TSPAN3-207ENST00000559494 ZDHHC2Q9UIJ5 367 aa19.05■□□□□ 0.64
TSPAN3-207ENST00000559494 RALYQ9UKM9 306 aaKnown RBP19.05■□□□□ 0.64
TSPAN3-207ENST00000559494 MRPS33Q9Y291 106 aaKnown RBP19.05■□□□□ 0.64
TSPAN3-207ENST00000559494 A0A1W2PR48 441 aa19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 A6NL46 340 aa19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 TMEM233B4DJY2 109 aa19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 CLDN4O14493 209 aa19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 CTNSO60931 367 aa19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 HSD17B7P56937 341 aa19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 ABCE1P61221 599 aaKnown RBP19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 BTKQ06187 659 aa19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 Q0VFX4 171 aa19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 CCNYL2Q5T2Q4 361 aa19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 PAGE2Q7Z2X7 111 aa19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 PARP9Q8IXQ6 854 aa19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 EFCAB3Q8N7B9 438 aa19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 UCN3Q969E3 161 aa19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 IMMP1LQ96LU5 166 aa19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 BBC3Q96PG8 261 aaPredicted RBP19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 ZNF160Q9HCG1 818 aa19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 LYARQ9NX58 379 aaKnown RBP19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 MS4A12Q9NXJ0 267 aa19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 NKIRAS1Q9NYS0 192 aa19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 C19orf25Q9UFG5 118 aaPredicted RBP19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 PHF11Q9UIL8 331 aa19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 CCL27Q9Y4X3 112 aa19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 DNAJC15Q9Y5T4 150 aa19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 PTGDR2Q9Y5Y4 395 aa19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 SPACA6W5XKT8 324 aa19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 TLN1Q9Y490 2541 aaKnown RBP19.04■□□□□ 0.64
TSPAN3-207ENST00000559494 NSG1A0A0A6YYJ2 146 aa19.03■□□□□ 0.64
TSPAN3-207ENST00000559494 TCRBV16S1A1N1A0A5B0 115 aa19.03■□□□□ 0.64
TSPAN3-207ENST00000559494 WASHC1A8K0Z3 465 aa19.03■□□□□ 0.64
TSPAN3-207ENST00000559494 TMEM114B3SHH9 223 aa19.03■□□□□ 0.64
TSPAN3-207ENST00000559494 PRKRAO75569 313 aaKnown RBP19.03■□□□□ 0.64
TSPAN3-207ENST00000559494 CEACAM4O75871 244 aa19.03■□□□□ 0.64
TSPAN3-207ENST00000559494 SEC24DO94855 1032 aaPredicted RBP19.03■□□□□ 0.64
TSPAN3-207ENST00000559494 NEFHP12036 1026 aa19.03■□□□□ 0.64
TSPAN3-207ENST00000559494 SOX8P57073 446 aa19.03■□□□□ 0.64
TSPAN3-207ENST00000559494 OR4D2P58180 307 aa19.03■□□□□ 0.64
TSPAN3-207ENST00000559494 RAE1P78406 368 aaKnown RBP19.03■□□□□ 0.64
TSPAN3-207ENST00000559494 AIMP2Q13155 320 aaKnown RBP19.03■□□□□ 0.64
TSPAN3-207ENST00000559494 SLC13A2Q13183 592 aa19.03■□□□□ 0.64
TSPAN3-207ENST00000559494 LY6DQ14210 128 aa19.03■□□□□ 0.64
TSPAN3-207ENST00000559494 SFT2D3Q587I9 215 aa19.03■□□□□ 0.64
TSPAN3-207ENST00000559494 SH2D4BQ5SQS7 431 aa19.03■□□□□ 0.64
TSPAN3-207ENST00000559494 CLNKQ7Z7G1 428 aa19.03■□□□□ 0.64
TSPAN3-207ENST00000559494 CLEC1AQ8NC01 280 aa19.03■□□□□ 0.64
TSPAN3-207ENST00000559494 AGR3Q8TD06 166 aa19.03■□□□□ 0.64
TSPAN3-207ENST00000559494 ANKRD9Q96BM1 317 aaPredicted RBP19.03■□□□□ 0.64
TSPAN3-207ENST00000559494 C11orf24Q96F05 449 aaPredicted RBP19.03■□□□□ 0.64
TSPAN3-207ENST00000559494 MYOCOSA0A1B0GUC4 107 aa19.02■□□□□ 0.64
TSPAN3-207ENST00000559494 HMGB1P1B2RPK0 211 aaPredicted RBP19.02■□□□□ 0.64
TSPAN3-207ENST00000559494 ATXN7O15265 892 aaPredicted RBP19.02■□□□□ 0.64
TSPAN3-207ENST00000559494 LDB3O75112 727 aa19.02■□□□□ 0.64
TSPAN3-207ENST00000559494 GRK2P25098 689 aa19.02■□□□□ 0.64
TSPAN3-207ENST00000559494 SLC1A6P48664 564 aa19.02■□□□□ 0.64
TSPAN3-207ENST00000559494 TNFRSF17Q02223 184 aa19.02■□□□□ 0.64
TSPAN3-207ENST00000559494 ACTN3Q08043 901 aaPredicted RBP19.02■□□□□ 0.64
TSPAN3-207ENST00000559494 STX3Q13277 289 aa19.02■□□□□ 0.64
TSPAN3-207ENST00000559494 KCNAB2Q13303 367 aa19.02■□□□□ 0.64
TSPAN3-207ENST00000559494 RNF165Q6ZSG1 346 aa19.02■□□□□ 0.64
TSPAN3-207ENST00000559494 Q6ZSR9 355 aa19.02■□□□□ 0.64
TSPAN3-207ENST00000559494 GALNT16Q8N428 558 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms