RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 CCNYL2Q5T2Q4 361 aa13.96□□□□□ -0.17
SNRPA1-207ENST00000559309 IKBIPQ70UQ0 350 aa13.96□□□□□ -0.17
SNRPA1-207ENST00000559309 GPR180Q86V85 440 aa13.96□□□□□ -0.17
SNRPA1-207ENST00000559309 TMEM151BQ8IW70 566 aa13.96□□□□□ -0.17
SNRPA1-207ENST00000559309 SCUBE1Q8IWY4 988 aa13.96□□□□□ -0.17
SNRPA1-207ENST00000559309 METTL27Q8N6F8 245 aaPredicted RBP13.96□□□□□ -0.17
SNRPA1-207ENST00000559309 STT3BQ8TCJ2 826 aa13.96□□□□□ -0.17
SNRPA1-207ENST00000559309 C16orf78Q8WTQ4 265 aa13.96□□□□□ -0.17
SNRPA1-207ENST00000559309 CT55Q8WUE5 264 aa13.96□□□□□ -0.17
SNRPA1-207ENST00000559309 ZCCHC14Q8WYQ9 949 aaKnown RBP13.96□□□□□ -0.17
SNRPA1-207ENST00000559309 CSF3RQ99062 836 aa13.96□□□□□ -0.17
SNRPA1-207ENST00000559309 COPS7BQ9H9Q2 264 aaPredicted RBP13.96□□□□□ -0.17
SNRPA1-207ENST00000559309 NPHS2Q9NP85 383 aa13.96□□□□□ -0.17
SNRPA1-207ENST00000559309 C14orf105Q9NVL8 296 aa13.96□□□□□ -0.17
SNRPA1-207ENST00000559309 AIG1Q9NVV5 245 aa13.96□□□□□ -0.17
SNRPA1-207ENST00000559309 TEX10Q9NXF1 929 aaPredicted RBP13.96□□□□□ -0.17
SNRPA1-207ENST00000559309 TAS2R7Q9NYW3 318 aa13.96□□□□□ -0.17
SNRPA1-207ENST00000559309 CTSFQ9UBX1 484 aa13.96□□□□□ -0.17
SNRPA1-207ENST00000559309 NDOR1Q9UHB4 597 aa13.96□□□□□ -0.17
SNRPA1-207ENST00000559309 PHF11Q9UIL8 331 aa13.96□□□□□ -0.17
SNRPA1-207ENST00000559309 POLR3HQ9Y535 204 aaPredicted RBP13.96□□□□□ -0.17
SNRPA1-207ENST00000559309 GPR45Q9Y5Y3 372 aa13.96□□□□□ -0.17
SNRPA1-207ENST00000559309 AK5Q9Y6K8 562 aa13.96□□□□□ -0.17
SNRPA1-207ENST00000559309 CCDC88CQ9P219 2028 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 LOC400499M0QZD8 3231 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 SNX3O60493 162 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 FHP07954 510 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 CD63P08962 238 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 ANXA4P09525 319 aaPredicted RBP13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 PRPS2P11908 318 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 XCR1P46094 333 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 MAPK12P53778 367 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 DIO3P55073 304 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 IRX1P78414 480 aaPredicted RBP13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 RHAGQ02094 409 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 KLC1Q07866 573 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 CLN3Q13286 438 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 GALNTL6Q49A17 601 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 ARHGAP40Q5TG30 622 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 IL23RQ5VWK5 629 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 CPZQ66K79 652 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 SPATA19Q7Z5L4 167 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 MTERF4Q7Z6M4 381 aaKnown RBP13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 ZNF595Q8IYB9 648 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 CACNA2D3Q8IZS8 1091 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 PLPP5Q8NEB5 264 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 FGF11Q92914 225 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 MR1Q95460 341 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 TBC1D20Q96BZ9 403 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 RNF31Q96EP0 1072 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 EGLN2Q96KS0 407 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 PPP1R36Q96LQ0 422 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 GPR87Q9BY21 358 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 EPN3Q9H201 632 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 TCF7L2Q9NQB0 619 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 NOP53Q9NZM5 478 aaKnown RBP13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 EHD3Q9NZN3 535 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 HCN3Q9P1Z3 774 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 IFT80Q9P2H3 777 aaPredicted RBP13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 HEY2Q9UBP5 337 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 ZNF282Q9UDV7 671 aaPredicted RBP13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 NXT1Q9UKK6 140 aaKnown RBP13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 PCSK5Q92824 1860 aa13.95□□□□□ -0.18
SNRPA1-207ENST00000559309 GOLGA8QA0A0J9YX86 632 aa13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 GOLGA8OA6NCC3 632 aa13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 GOLGA8NF8WBI6 632 aa13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 TGFBR3LH3BV60 316 aa13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 AIFM1O95831 613 aa13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 UMODP07911 640 aa13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 ZGLP1P0C6A0 271 aa13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 CCNYL3P0C7X3 344 aa13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 TROVE2P10155 538 aaKnown RBP eCLIP13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 DRD2P14416 443 aa13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 MAPK1P28482 360 aa13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 ZFP36L2P47974 494 aaKnown RBP13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 HSD17B7P56937 341 aa13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 VWA2Q5GFL6 755 aa13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 METTL21CQ5VZV1 264 aa13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 CYP20A1Q6UW02 462 aa13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 QSOX2Q6ZRP7 698 aa13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 CAMKMTQ7Z624 323 aa13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 LAPTM4BQ86VI4 370 aa13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 FNDC5Q8NAU1 212 aa13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 OR2Y1Q8NGV0 311 aa13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 DNAJB14Q8TBM8 379 aa13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 COL26A1Q96A83 441 aa13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 SMG1Q96Q15 3661 aaKnown RBP13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 TMEM120AQ9BXJ8 343 aa13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 SLC7A5P2Q9GIP4 190 aa13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 SDR39U1Q9NRG7 319 aaPredicted RBP13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 TRPC4Q9UBN4 977 aa13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 PCDHA9Q9Y5H5 950 aa13.94□□□□□ -0.18
SNRPA1-207ENST00000559309 C1orf226A1L170 272 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 FAM227AF5H4B4 570 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 PRMT3O60678 531 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 DIAPH2O60879 1101 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 JRKO75564 520 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 IL3P08700 152 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 G6PDP11413 515 aa13.93□□□□□ -0.18
SNRPA1-207ENST00000559309 DDCP20711 480 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms