RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 BLOC1S5-TXNDC5H3BN57 136 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 SLC1A7O00341 560 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 GRID2O43424 1007 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 CSO75390 466 aaKnown RBP1.41□□□□□ -2.18
USP3-209ENST00000558925 KRT33AO76009 404 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 KRT36O76013 467 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 ZNF432O94892 652 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 DUS4LO95620 317 aaKnown RBP1.41□□□□□ -2.18
USP3-209ENST00000558925 DIRAS3O95661 229 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 ANGPTL1O95841 491 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 TXNDC12O95881 172 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 PAK4O96013 591 aaPredicted RBP1.41□□□□□ -2.18
USP3-209ENST00000558925 IGHEP01854 428 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 AMBPP02760 352 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 RPLP0P05388 317 aaKnown RBP1.41□□□□□ -2.18
USP3-209ENST00000558925 PGK2P07205 417 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 CFC1BP0CG36 223 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 CFC1P0CG37 223 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 PRKAR1AP10644 381 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 KRT3P12035 628 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 NCF1P14598 390 aaPredicted RBP1.41□□□□□ -2.18
USP3-209ENST00000558925 GNB3P16520 340 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 CYP3A5P20815 502 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 C4BPBP20851 252 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 IL10P22301 178 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 AADACP22760 399 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 GLRA1P23415 457 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 PKLRP30613 574 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 CHRNB4P30926 498 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 TRIM23P36406 574 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 FEN1P39748 380 aaKnown RBP1.41□□□□□ -2.18
USP3-209ENST00000558925 MMP12P39900 470 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 ID1P41134 155 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 MTIF2P46199 727 aaKnown RBP1.41□□□□□ -2.18
USP3-209ENST00000558925 SLC26A5P58743 744 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 SNRPD1P62314 119 aaKnown RBP1.41□□□□□ -2.18
USP3-209ENST00000558925 GNB1P62873 340 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 IRX4P78413 519 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 KCNJ10P78508 379 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 HTD2P86397 168 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 GUCY2DQ02846 1103 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 KLHL30Q0D2K2 578 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 FUT7Q11130 342 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 SPP2Q13103 211 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 SGCGQ13326 291 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 TSTA3Q13630 321 aaPredicted RBP1.41□□□□□ -2.18
USP3-209ENST00000558925 GAMTQ14353 236 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 RFTN1Q14699 578 aaPredicted RBP1.41□□□□□ -2.18
USP3-209ENST00000558925 EXOSC7Q15024 291 aaKnown RBP1.41□□□□□ -2.18
USP3-209ENST00000558925 EFTUD2Q15029 972 aaKnown RBP eCLIP1.41□□□□□ -2.188e-7■■■■□ 19.8
USP3-209ENST00000558925 OR1C1Q15619 314 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 TAB1Q15750 504 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 ZKSCAN8Q15776 578 aaPredicted RBP1.41□□□□□ -2.18
USP3-209ENST00000558925 FAM189A2Q15884 450 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 CCDC40Q4G0X9 1142 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 GPAT3Q53EU6 434 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 FGD3Q5JSP0 725 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 C9orf50Q5SZB4 431 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 ADAMTSL4-AS1Q5T5F5 129 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 LCE3AQ5TA76 89 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 C12orf60Q5U649 245 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 LIPKQ5VXJ0 399 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 NKAIN2Q5VXU1 208 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 PLPP4Q5VZY2 271 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 CES4AQ5XG92 561 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 SNRNP48Q6IEG0 339 aaKnown RBP1.41□□□□□ -2.18
USP3-209ENST00000558925 CAPN13Q6MZZ7 669 aaPredicted RBP1.41□□□□□ -2.18
USP3-209ENST00000558925 NEK5Q6P3R8 708 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 PSRC1Q6PGN9 363 aaPredicted RBP1.41□□□□□ -2.18
USP3-209ENST00000558925 UNC5DQ6UXZ4 953 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 NOTCH2NLQ7Z3S9 236 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 ERASQ7Z444 233 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 TAF8Q7Z7C8 310 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 NLRP14Q86W24 1093 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 DCUN1D3Q8IWE4 304 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 KLHDC8BQ8IXV7 354 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 PARP8Q8N3A8 854 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 CCDC185Q8N715 623 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 NIPA2Q8N8Q9 360 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 OR56B1Q8NGI3 324 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 OR10G8Q8NGN5 311 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 OR6S1Q8NH40 331 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 RPLP0P6Q8NHW5 317 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 ZNRF4Q8WWF5 429 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 SELENOMQ8WWX9 145 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 LIPHQ8WWY8 451 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 TAF4BQ92750 862 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 MRPL24Q96A35 216 aaKnown RBP1.41□□□□□ -2.18
USP3-209ENST00000558925 RAB39BQ96DA2 213 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 OMA1Q96E52 524 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 CNRIP1Q96F85 164 aaPredicted RBP1.41□□□□□ -2.18
USP3-209ENST00000558925 COG3Q96JB2 828 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 GPR137Q96N19 417 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 TSGA13Q96PP4 275 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 S1PR3Q99500 378 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 EPYCQ99645 322 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 SPAG8Q99932 426 aaPredicted RBP1.41□□□□□ -2.18
USP3-209ENST00000558925 CCM2Q9BSQ5 444 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 FUCA2Q9BTY2 467 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 TDRD1Q9BXT4 1180 aaKnown RBP1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms