RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 PCDHGA8Q9Y5G5 932 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 PCDHA9Q9Y5H5 950 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 ZNF780BQ9Y6R6 833 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 PTPRBP23467 1997 aa11.74□□□□□ -0.53
TPM1-209ENST00000558072 A0A0A6YYC8 382 aaPredicted RBP11.73□□□□□ -0.53
TPM1-209ENST00000558072 A0A1W2PP18 115 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 I3L1I5 382 aaPredicted RBP11.73□□□□□ -0.53
TPM1-209ENST00000558072 PCDH17O14917 1159 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 ANKRD28O15084 1053 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 SLITRK5O94991 958 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 ALBP02768 609 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 PGRP06401 933 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 IL3P08700 152 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 FURINP09958 794 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 CCNYL3P0C7X3 344 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 ITGAXP20702 1163 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 FBLP22087 321 aaKnown RBP11.73□□□□□ -0.53
TPM1-209ENST00000558072 NTSP30990 170 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 GCGRP47871 477 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 LIM2P55344 173 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 UFM1P61960 85 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 TNFRSF17Q02223 184 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 OCA2Q04671 838 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 PDE7AQ13946 482 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 UBAP2LQ14157 1087 aaKnown RBP11.73□□□□□ -0.53
TPM1-209ENST00000558072 PTGR1Q14914 329 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 NDUFAF5Q5TEU4 345 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 PAOXQ6QHF9 649 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 ZNF793Q6ZN11 406 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 RIMKLAQ8IXN7 391 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 DTWD1Q8N5C7 304 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 OR9A4Q8NGU2 314 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 COL26A1Q96A83 441 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 ZBED6CLQ96FA7 236 aaPredicted RBP11.73□□□□□ -0.53
TPM1-209ENST00000558072 ITCHQ96J02 903 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 RPF2Q9H7B2 306 aaKnown RBP11.73□□□□□ -0.53
TPM1-209ENST00000558072 STARD5Q9NSY2 213 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.73□□□□□ -0.53
TPM1-209ENST00000558072 OCIAD1Q9NX40 245 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 SH3BP4Q9P0V3 963 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 ARMCX1Q9P291 453 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 BAIAP2L1Q9UHR4 511 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 NXT1Q9UKK6 140 aaKnown RBP11.73□□□□□ -0.53
TPM1-209ENST00000558072 FBXW2Q9UKT8 454 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 ENTPD4Q9Y227 616 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 AP3M1Q9Y2T2 418 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 MMACHCQ9Y4U1 282 aa11.73□□□□□ -0.53
TPM1-209ENST00000558072 KIF26BQ2KJY2 2108 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 A0A0G2JN53 185 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 PRSS51A0A1B0GVH4 220 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 C9J4A7 227 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 NR5A2O00482 541 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 RNASET2O00584 256 aaKnown RBP11.72□□□□□ -0.53
TPM1-209ENST00000558072 CHST10O43529 356 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 FOXS1O43638 330 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 TMPRSS11DO60235 418 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 KRT16P08779 473 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 COX4I1P13073 169 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 CCL4P13236 92 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 ITIH1P19827 911 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 TACR1P25103 407 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 MPIP34949 423 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 ETV5P41161 510 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 ALDH9A1P49189 494 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 HNRNPFP52597 415 aaKnown RBP11.72□□□□□ -0.53
TPM1-209ENST00000558072 HSD17B7P56937 341 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 ART3Q13508 389 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 SERTAD2Q14140 314 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 MAP7Q14244 749 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 MAPKAPK3Q16644 382 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 ZSCAN26Q16670 478 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 ARHGAP40Q5TG30 622 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 PRAMEF17Q5VTA0 474 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 PWWP2BQ6NUJ5 590 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 FOXR1Q6PIV2 292 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 CA13Q8N1Q1 262 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 TRIML2Q8N7C3 387 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 OR4K14Q8NGD5 310 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 FKBP10Q96AY3 582 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 TBC1D20Q96BZ9 403 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 ROPN1LQ96C74 230 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 MARK4Q96L34 752 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 OR52E6Q96RD3 313 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 CTRCQ99895 268 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 SH3GL1Q99961 368 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 DUSP26Q9BV47 211 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 AICDAQ9GZX7 198 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 APMAPQ9HDC9 416 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 ACSS1Q9NUB1 689 aaPredicted RBP11.72□□□□□ -0.53
TPM1-209ENST00000558072 KCMF1Q9P0J7 381 aa11.72□□□□□ -0.53
TPM1-209ENST00000558072 ZNF282Q9UDV7 671 aaPredicted RBP11.72□□□□□ -0.53
TPM1-209ENST00000558072 GPN3Q9UHW5 284 aaPredicted RBP11.72□□□□□ -0.53
TPM1-209ENST00000558072 PTPRZ1P23471 2315 aaPredicted RBP11.72□□□□□ -0.53
TPM1-209ENST00000558072 SPEGQ15772 3267 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 C15orf38-AP3S2A0A0A6YYH1 394 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 GABRR3A8MPY1 467 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 SGK494L7N484 410 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 AKAP10O43572 662 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 DYRK3O43781 588 aa11.71□□□□□ -0.53
TPM1-209ENST00000558072 RDH16O75452 317 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms