RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 CNBD1Q8NA66 436 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 CCDC197Q8NCU1 140 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 OR13C5Q8NGS8 318 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 RAET1EQ8TD07 263 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 TMEM37Q8WXS4 190 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 PIK3R3Q92569 461 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 OSTF1Q92882 214 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 LRR1Q96L50 414 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 VSTM2LQ96N03 204 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 KRT12Q99456 494 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 CCDC3Q9BQI4 270 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 MTG1Q9BT17 334 aaPredicted RBP3.46□□□□□ -1.86
TDP1-217ENST00000557782 C1QTNF3Q9BXJ4 246 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 SEMA4CQ9C0C4 833 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 CALHM2Q9HA72 323 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 A4GALTQ9NPC4 353 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 TCF7L2Q9NQB0 619 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 RPRD1BQ9NQG5 326 aaKnown RBP3.46□□□□□ -1.86
TDP1-217ENST00000557782 SMARCAL1Q9NZC9 954 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 THEGQ9P2T0 379 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 CRLS1Q9UJA2 301 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 B9D1Q9UPM9 204 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 INSL6Q9Y581 213 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 R4GN57 208 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 ARID2Q68CP9 1835 aa3.46□□□□□ -1.86
TDP1-217ENST00000557782 GOLGA6L7A0A1B0GV03 622 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 MANSC4A6NHS7 340 aaPredicted RBP3.45□□□□□ -1.86
TDP1-217ENST00000557782 ZNF732B4DXR9 585 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 WASH3PC4AMC7 463 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 E9PMD0 336 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 SGK494L7N484 410 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 CLDN5O00501 218 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 SDHDO14521 159 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 KRT86O43790 486 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 LCMT2O60294 686 aaKnown RBP3.45□□□□□ -1.86
TDP1-217ENST00000557782 ECE2O60344 883 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 JAK2O60674 1132 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 PRKRAO75569 313 aaKnown RBP3.45□□□□□ -1.86
TDP1-217ENST00000557782 LATS1O95835 1130 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 TXNDC12O95881 172 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 GCP02774 474 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 HNF1AP20823 631 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 ACKR3P25106 362 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 PSMA2P25787 234 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 CAPGP40121 348 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 MATKP42679 507 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 KCNJ4P48050 445 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 NPY2RP49146 381 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 CCR4P51679 360 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 RPS8P62241 208 aaKnown RBP3.45□□□□□ -1.86
TDP1-217ENST00000557782 HERVK_113P63132 956 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 ERVK-8P63133 956 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 MYL7Q01449 175 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 SRSF5Q13243 272 aaKnown RBP3.45□□□□□ -1.86
TDP1-217ENST00000557782 KRT81Q14533 505 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 MEF2DQ14814 521 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 DAZAP2Q15038 168 aaPredicted RBP3.45□□□□□ -1.86
TDP1-217ENST00000557782 FGD3Q5JSP0 725 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 C10orf25Q5T742 122 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 TAF3Q5VWG9 929 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 WASH2PQ6VEQ5 465 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 Q6ZPB1 254 aaPredicted RBP3.45□□□□□ -1.86
TDP1-217ENST00000557782 C17orf107Q6ZR85 190 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 TRMT1LQ7Z2T5 733 aaKnown RBP3.45□□□□□ -1.86
TDP1-217ENST00000557782 C16orf62Q7Z3J2 963 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 PIWIL4Q7Z3Z4 852 aaKnown RBP3.45□□□□□ -1.86
TDP1-217ENST00000557782 LHFPL4Q7Z7J7 247 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 SLC22A16Q86VW1 577 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 KMT5CQ86Y97 462 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 ZNF683Q8IZ20 524 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 ELMOD1Q8N336 334 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 ARFGAP1Q8N6T3 406 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 NIPA2Q8N8Q9 360 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 NEXN-AS1Q8NBZ9 246 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 KCNH5Q8NCM2 988 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 PRSS3P2Q8NHM4 247 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 TCP11Q8WWU5 503 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 EMG1Q92979 244 aaKnown RBP3.45□□□□□ -1.86
TDP1-217ENST00000557782 BPIFA2Q96DR5 249 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 DEFB118Q96PH6 123 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 NPAS2Q99743 824 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 CCM2Q9BSQ5 444 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 NDUFAF3Q9BU61 184 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 RBM24Q9BX46 236 aaKnown RBP3.45□□□□□ -1.86
TDP1-217ENST00000557782 ERVK-6Q9BXR3 956 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 LRRCC1Q9C099 1032 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 EXO5Q9H790 373 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 ZNF665Q9H7R5 613 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 MEAF6Q9HAF1 191 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 APOBEC3GQ9HC16 384 aaKnown RBP3.45□□□□□ -1.86
TDP1-217ENST00000557782 ZNF224Q9NZL3 707 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 ZNF319Q9P2F9 582 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 C19orf25Q9UFG5 118 aaPredicted RBP3.45□□□□□ -1.86
TDP1-217ENST00000557782 DIMT1Q9UNQ2 313 aaKnown RBP3.45□□□□□ -1.86
TDP1-217ENST00000557782 SATB2Q9UPW6 733 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 VDAC3Q9Y277 283 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 HS3ST3B1Q9Y662 390 aa3.45□□□□□ -1.86
TDP1-217ENST00000557782 CARMIL1Q5VZK9 1371 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 LOC105371242A0A075B767 164 aa3.44□□□□□ -1.86
TDP1-217ENST00000557782 SERTM2A0A1B0GWG4 89 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms