RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 SLC10A3P09131 477 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 FURINP09958 794 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 MYL9P24844 172 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 SOAT1P35610 550 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 GNG2P59768 71 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 MLLT11Q13015 90 aaPredicted RBP11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 ILKQ13418 452 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 SYTL3Q4VX76 610 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 SNAP47Q5SQN1 464 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 PDZK1Q5T2W1 519 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 RNLSQ5VYX0 342 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 Q6ZNB5 142 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 ZNF438Q7Z4V0 828 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 ADAMTS19Q8TE59 1207 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 SLC25A46Q96AG3 418 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 RIPOR3Q96MK2 946 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 SLC22A12Q96S37 553 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 WRAP53Q9BUR4 548 aaKnown RBP11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 RANGRFQ9HD47 186 aaPredicted RBP11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 ABCB9Q9NP78 766 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 NDOR1Q9UHB4 597 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 NUFIP1Q9UHK0 495 aaKnown RBP11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 MGAT4BQ9UQ53 548 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 YIPF1Q9Y548 306 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 BACE2Q9Y5Z0 518 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 HELZP42694 1942 aaKnown RBP11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 FABP12A6NFH5 140 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 FAM227AF5H4B4 570 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 TMCC2O75069 709 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 IL1AP01583 271 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 ALPPP05187 535 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 HBQ1P09105 142 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 CCND3P30281 292 aaPredicted RBP11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 MLLT3P42568 568 aaPredicted RBP11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 ARPC4P59998 168 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 MXD1Q05195 221 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 C2orf80Q0P641 193 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 PDE7AQ13946 482 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 LEXMQ3ZCV2 418 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 YIF1BQ5BJH7 314 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 OTOP2Q7RTS6 562 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 BTN2A2Q8WVV5 523 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 FRMD6Q96NE9 622 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 PKP4Q99569 1192 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 C11orf54Q9H0W9 315 aaPredicted RBP11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 RPRD1BQ9NQG5 326 aaKnown RBP11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 B4GALT6Q9UBX8 382 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 REV1Q9UBZ9 1251 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 SNX11Q9Y5W9 270 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 KCNE2Q9Y6J6 123 aa11.28□□□□□ -0.6
VIPAS39-211ENST00000557658 TRBV4-1A0A0J9YWV2 114 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 B4DXG7 233 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 WWP2O00308 870 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 LGI1O95970 557 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 CSF3P09919 207 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 CHRNB1P11230 501 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 SRCP12931 536 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 CD70P32970 193 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 TGM4P49221 684 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 DSTNP60981 165 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 MC1RQ01726 317 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 ZNF91Q05481 1191 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 CCSMST1Q4G0I0 132 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 SLC35F1Q5T1Q4 408 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 LIPKQ5VXJ0 399 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 COMMD6Q7Z4G1 85 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 PHC2Q8IXK0 858 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 FAM217AQ8IXS0 508 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 CLDN22Q8N7P3 220 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 ARL14EPQ8N8R7 260 aaPredicted RBP11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 OR8J1Q8NGP2 316 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 OR56A3Q8NH54 315 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 DIRAS2Q96HU8 199 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 MSLNLQ96KJ4 702 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 FYTTD1Q96QD9 318 aaKnown RBP11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 TSSK6Q9BXA6 273 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 MRPL9Q9BYD2 267 aaKnown RBP11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 RNF121Q9H920 327 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 WDR70Q9NW82 654 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 CLEC4EQ9ULY5 219 aa11.27□□□□□ -0.6
VIPAS39-211ENST00000557658 A0A1W2PRB8 838 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 OR2AG2A6NM03 316 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 H3BN98 237 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 SEC14L5O43304 696 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 SOX14O95416 240 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 RECKO95980 971 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 GBAP04062 536 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 IMPA1P29218 277 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 FEN1P39748 380 aaKnown RBP11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 GSTM5P46439 218 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 BDKRB1P46663 353 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 STK19P49842 368 aaPredicted RBP11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 XKP51811 444 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 ACLYP53396 1101 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 BNC1Q01954 994 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 HNRNPA0Q13151 305 aaKnown RBP11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 DUSP7Q16829 419 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 LRRC73Q5JTD7 316 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 MFSD4BQ5TF39 518 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms