RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 OR6J1Q8NGC5 347 aa4.04□□□□□ -1.76
GPHN-215ENST00000557654 OR8K1Q8NGG5 319 aa4.04□□□□□ -1.76
GPHN-215ENST00000557654 NCOA7Q8NI08 942 aa4.04□□□□□ -1.76
GPHN-215ENST00000557654 CHPT1Q8WUD6 406 aa4.04□□□□□ -1.76
GPHN-215ENST00000557654 TCP11Q8WWU5 503 aa4.04□□□□□ -1.76
GPHN-215ENST00000557654 N4BP2L2Q92802 583 aaPredicted RBP4.04□□□□□ -1.76
GPHN-215ENST00000557654 TSACCQ96A04 125 aaPredicted RBP4.04□□□□□ -1.76
GPHN-215ENST00000557654 FOXN4Q96NZ1 517 aa4.04□□□□□ -1.76
GPHN-215ENST00000557654 OVOL2Q9BRP0 275 aa4.04□□□□□ -1.76
GPHN-215ENST00000557654 TSGA10Q9BZW7 698 aa4.04□□□□□ -1.76
GPHN-215ENST00000557654 TRIM6Q9C030 488 aaPredicted RBP4.04□□□□□ -1.76
GPHN-215ENST00000557654 ANKRD2Q9GZV1 360 aa4.04□□□□□ -1.76
GPHN-215ENST00000557654 AATFQ9NY61 560 aaKnown RBP eCLIP4.04□□□□□ -1.76
GPHN-215ENST00000557654 RWDD2AQ9UIY3 292 aa4.04□□□□□ -1.76
GPHN-215ENST00000557654 ABCA7Q8IZY2 2146 aa4.04□□□□□ -1.76
GPHN-215ENST00000557654 ARHGAP23Q9P227 1491 aa4.04□□□□□ -1.76
GPHN-215ENST00000557654 DISP2A7MBM2 1401 aa4.04□□□□□ -1.76
GPHN-215ENST00000557654 ADAMTS13Q76LX8 1427 aa4.04□□□□□ -1.76
GPHN-215ENST00000557654 PIK3C2AO00443 1686 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 ADAMTS7Q9UKP4 1686 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 UBN2Q6ZU65 1347 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 DIP2BQ9P265 1576 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 TRAV24A0A0B4J272 114 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 MTMR11A4FU01 709 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 ASB14A6NK59 587 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 HMGB1P1B2RPK0 211 aaPredicted RBP4.03□□□□□ -1.76
GPHN-215ENST00000557654 NPIPB9F8W1W9 429 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 LIN7AO14910 233 aaPredicted RBP4.03□□□□□ -1.76
GPHN-215ENST00000557654 MGRN1O60291 552 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 FAM107AO95990 144 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 IGHV3-13P01766 116 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 SERPING1P05155 500 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 TCP1P17987 556 aaKnown RBP4.03□□□□□ -1.76
GPHN-215ENST00000557654 CYLC1P35663 651 aaPredicted RBP4.03□□□□□ -1.76
GPHN-215ENST00000557654 MDH1P40925 334 aaKnown RBP4.03□□□□□ -1.76
GPHN-215ENST00000557654 RAD52P43351 418 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 RAB28P51157 221 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 DCDC1P59894 354 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 TFCP2Q12800 502 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 PRPF4BQ13523 1007 aaKnown RBP4.03□□□□□ -1.76
GPHN-215ENST00000557654 OPCMLQ14982 345 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 KRT31Q15323 416 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 NOTUMQ6P988 496 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 CYB5D1Q6P9G0 228 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 CCDC121Q6ZUS5 278 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 CHMP1BQ7LBR1 199 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 KIAA1328Q86T90 577 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 NLRP14Q86W24 1093 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 FAM228AQ86W67 206 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 CDC20BQ86Y33 519 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 RYBPQ8N488 228 aaPredicted RBP4.03□□□□□ -1.76
GPHN-215ENST00000557654 HDAC11Q96DB2 347 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 SLC45A3Q96JT2 553 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 ANKRD27Q96NW4 1050 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 CCT8L2Q96SF2 557 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 NDNQ99608 321 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 SH3GL3Q99963 347 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 NUP58Q9BVL2 599 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 RAB11FIP5Q9BXF6 653 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 CCDC177Q9NQR7 707 aaPredicted RBP4.03□□□□□ -1.76
GPHN-215ENST00000557654 GDF3Q9NR23 364 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 HOMER3Q9NSC5 361 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 ZNHIT6Q9NWK9 470 aaKnown RBP4.03□□□□□ -1.76
GPHN-215ENST00000557654 RNF14Q9UBS8 474 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 SNX12Q9UMY4 172 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 WIPI2Q9Y4P8 454 aa4.03□□□□□ -1.76
GPHN-215ENST00000557654 PARP4Q9UKK3 1724 aaKnown RBP4.03□□□□□ -1.76
GPHN-215ENST00000557654 MARF1Q9Y4F3 1742 aaKnown RBP4.03□□□□□ -1.76
GPHN-215ENST00000557654 PHRF1Q9P1Y6 1649 aaKnown RBP4.03□□□□□ -1.77
GPHN-215ENST00000557654 NWD2Q9ULI1 1742 aa4.02□□□□□ -1.77
GPHN-215ENST00000557654 P4HA2O15460 535 aa4.02□□□□□ -1.77
GPHN-215ENST00000557654 POLR2DO15514 142 aaKnown RBP4.02□□□□□ -1.77
GPHN-215ENST00000557654 ECE2O60344 883 aa4.02□□□□□ -1.77
GPHN-215ENST00000557654 SRSF10O75494 262 aaKnown RBP4.02□□□□□ -1.77
GPHN-215ENST00000557654 KRT33AO76009 404 aa4.02□□□□□ -1.77
GPHN-215ENST00000557654 CIAO1O76071 339 aa4.02□□□□□ -1.77
GPHN-215ENST00000557654 LCA5LO95447 670 aa4.02□□□□□ -1.77
GPHN-215ENST00000557654 MMP1P03956 469 aa4.02□□□□□ -1.77
GPHN-215ENST00000557654 GSTA1P08263 222 aa4.02□□□□□ -1.77
GPHN-215ENST00000557654 THEGLP0DJG4 465 aa4.02□□□□□ -1.77
GPHN-215ENST00000557654 MYBL1P10243 752 aa4.02□□□□□ -1.77
GPHN-215ENST00000557654 IFNAR1P17181 557 aa4.02□□□□□ -1.77
GPHN-215ENST00000557654 EEF1B2P24534 225 aaKnown RBP4.02□□□□□ -1.77
GPHN-215ENST00000557654 HNRNPH3P31942 346 aaKnown RBP4.02□□□□□ -1.77
GPHN-215ENST00000557654 HSPA9P38646 679 aaKnown RBP4.02□□□□□ -1.77
GPHN-215ENST00000557654 RWDD2BP57060 319 aa4.02□□□□□ -1.77
GPHN-215ENST00000557654 SARNPP82979 210 aaKnown RBP4.02□□□□□ -1.77
GPHN-215ENST00000557654 CD300CQ08708 224 aa4.02□□□□□ -1.77
GPHN-215ENST00000557654 ANKRD20A8PQ5CZ79 823 aa4.02□□□□□ -1.77
GPHN-215ENST00000557654 TCP11X2Q5H9J9 407 aa4.02□□□□□ -1.77
GPHN-215ENST00000557654 CCDC122Q5T0U0 273 aa4.02□□□□□ -1.77
GPHN-215ENST00000557654 MFSD4BQ5TF39 518 aa4.02□□□□□ -1.77
GPHN-215ENST00000557654 AGBL2Q5U5Z8 902 aa4.02□□□□□ -1.77
GPHN-215ENST00000557654 WDR59Q6PJI9 974 aa4.02□□□□□ -1.77
GPHN-215ENST00000557654 ZER1Q7Z7L7 766 aa4.02□□□□□ -1.77
GPHN-215ENST00000557654 IFT20Q8IY31 132 aa4.02□□□□□ -1.77
GPHN-215ENST00000557654 FAM89BQ8N5H3 189 aa4.02□□□□□ -1.77
GPHN-215ENST00000557654 TDRD5Q8NAT2 981 aaKnown RBP4.02□□□□□ -1.77
GPHN-215ENST00000557654 SPATA4Q8NEY3 305 aa4.02□□□□□ -1.77
GPHN-215ENST00000557654 OR2L2Q8NH16 312 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms