RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 PCSK1NQ9UHG2 260 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 MAN1B1Q9UKM7 699 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 POMT2Q9UKY4 750 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.81□□□□□ -1.96
TRAV28-201ENST00000557548 ZNF521Q96K83 1311 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 KDRP35968 1356 aa2.81□□□□□ -1.96
TRAV28-201ENST00000557548 A0A1B0GUL7 405 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 A0A1W2PS18 150 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 DNAJC9-AS1A6NH13 148 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 ANKRD30BLA7E2S9 258 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 SRRM4A7MD48 611 aaKnown RBP2.8□□□□□ -1.96
TRAV28-201ENST00000557548 LGALS8O00214 317 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 PDXKO00764 312 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 CHEK1O14757 476 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 CASQ2O14958 399 aaPredicted RBP2.8□□□□□ -1.96
TRAV28-201ENST00000557548 PRKNO60260 465 aaPredicted RBP2.8□□□□□ -1.96
TRAV28-201ENST00000557548 GLRA3O75311 464 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 MTX2O75431 263 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 PALMO75781 387 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 CDK2AP2O75956 126 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 TXNDC12O95881 172 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 TSHBP01222 138 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 OPN1MWP04001 364 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 OPN1MW2P0DN77 364 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 OPN1MW3P0DN78 364 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 IGHV4-38-2P0DP08 117 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 SFTPCP11686 197 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 CYP11B1P15538 503 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 TNNI3P19429 210 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 DRD5P21918 477 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 GPX3P22352 226 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 GLRA2P23416 452 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 CTNNA2P26232 953 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 PTPN4P29074 926 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 PPP2R1AP30153 589 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 ADRA1AP35348 466 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 NUMBP49757 651 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 METAP1P53582 386 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 LIMK2P53671 638 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 DCDC1P59894 354 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 BTG1P62324 171 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 MAP2K1Q02750 393 aaPredicted RBP2.8□□□□□ -1.96
TRAV28-201ENST00000557548 CNTN1Q12860 1018 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 IL24Q13007 206 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 NME3Q13232 169 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 GRB14Q14449 540 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 MPPE1Q53F39 396 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 PDLIM3Q53GG5 364 aaPredicted RBP2.8□□□□□ -1.96
TRAV28-201ENST00000557548 XKR6Q5GH73 641 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 ATAD3BQ5T9A4 648 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 LIPJQ5W064 366 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 HIST2H2AA3Q6FI13 130 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 RTL6Q6ICC9 239 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 CAPRIN2Q6IMN6 1127 aaKnown RBP2.8□□□□□ -1.96
TRAV28-201ENST00000557548 CENPPQ6IPU0 288 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 TCEAL6Q6IPX3 200 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 CDC42EP5Q6NZY7 148 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 CCBE1Q6UXH8 406 aaPredicted RBP2.8□□□□□ -1.96
TRAV28-201ENST00000557548 RUFY3Q7L099 469 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 FCRLAQ7L513 359 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 GRAMD2AQ8IUY3 354 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 WDR49Q8IV35 697 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 IQCF2Q8IXL9 164 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 KIRREL3Q8IZU9 778 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 TCEANCQ8N8B7 351 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 MNS1Q8NEH6 495 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 OR13A1Q8NGR1 328 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 OR4C3Q8NH37 302 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 CD99L2Q8TCZ2 262 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 GPR148Q8TDV2 347 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 ZNF274Q96GC6 653 aaPredicted RBP2.8□□□□□ -1.96
TRAV28-201ENST00000557548 ZNF354BQ96LW1 612 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 ERGIC2Q96RQ1 377 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 PCDHB18PQ96TA0 734 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 LPAR4Q99677 370 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 PAIP2Q9BPZ3 127 aaKnown RBP2.8□□□□□ -1.96
TRAV28-201ENST00000557548 FICDQ9BVA6 458 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 WWP1Q9H0M0 922 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 FAM49AQ9H0Q0 323 aaPredicted RBP2.8□□□□□ -1.96
TRAV28-201ENST00000557548 SLC26A1Q9H2B4 701 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 BICC1Q9H694 974 aaKnown RBP2.8□□□□□ -1.96
TRAV28-201ENST00000557548 RMND5AQ9H871 391 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 GORASP2Q9H8Y8 452 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 FANCFQ9NPI8 374 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 FARSBQ9NSD9 589 aaKnown RBP2.8□□□□□ -1.96
TRAV28-201ENST00000557548 ATAD3AQ9NVI7 634 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 SMPD3Q9NY59 655 aaPredicted RBP2.8□□□□□ -1.96
TRAV28-201ENST00000557548 TECRQ9NZ01 308 aaKnown RBP2.8□□□□□ -1.96
TRAV28-201ENST00000557548 HACD3Q9P035 362 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 CHRNA9Q9UGM1 479 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 PRDM4Q9UKN5 801 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 DIMT1Q9UNQ2 313 aaKnown RBP2.8□□□□□ -1.96
TRAV28-201ENST00000557548 PPP2R2CQ9Y2T4 447 aa2.8□□□□□ -1.96
TRAV28-201ENST00000557548 MYH14Q7Z406 1995 aaKnown RBP2.8□□□□□ -1.96
TRAV28-201ENST00000557548 ZMYM6O95789 1325 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 A0A087WUV0 522 aaPredicted RBP2.79□□□□□ -1.96
TRAV28-201ENST00000557548 A0A087WZ39 114 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 SH3PXD2BA1X283 911 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 PRAC2D3DTV9 90 aa2.79□□□□□ -1.96
TRAV28-201ENST00000557548 H0YC42 278 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms