RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 TERF2Q15554 542 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 KRT71Q3SY84 523 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 NADK2Q4G0N4 442 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 SGO1Q5FBB7 561 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 CFAP157Q5JU67 520 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 LIPMQ5VYY2 423 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 PAGE2Q7Z2X7 111 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 GPR180Q86V85 440 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 EFCAB3Q8N7B9 438 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 CDYL2Q8N8U2 506 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 BANPQ8N9N5 519 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 PSMF1Q92530 271 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 CSF3RQ99062 836 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 SORBS1Q9BX66 1292 aaKnown RBP11.71□□□□□ -0.53
SLIRP-209ENST00000557342 GSTO2Q9H4Y5 243 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 DDX31Q9H8H2 851 aaKnown RBP11.71□□□□□ -0.53
SLIRP-209ENST00000557342 KCNK13Q9HB14 408 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 SLAMF7Q9NQ25 335 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 OXSMQ9NWU1 459 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 PTGFRNQ9P2B2 879 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 ZNF225Q9UK10 706 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 ADAM29Q9UKF5 820 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 FBXW2Q9UKT8 454 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 B3GNT3Q9Y2A9 372 aa11.71□□□□□ -0.53
SLIRP-209ENST00000557342 UQCRHLA0A096LP55 91 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 A0A0A6YYD5 115 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 A0A1B0GTL3 188 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 ARHGAP10A1A4S6 786 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 DYTNA2CJ06 578 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 RGS16O15492 202 aaPredicted RBP11.7□□□□□ -0.54
SLIRP-209ENST00000557342 ULK1O75385 1050 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 ETHE1O95571 254 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 ESRRBO95718 433 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 PDYNP01213 254 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 CELA2AP08217 269 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 PPP2R1BP30154 601 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 BSGP35613 385 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 SOX11P35716 441 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 HNRNPFP52597 415 aaKnown RBP11.7□□□□□ -0.54
SLIRP-209ENST00000557342 NAGLUP54802 743 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 TNFRSF17Q02223 184 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 STX4Q12846 297 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 ABHD17BQ5VST6 288 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 SLC6A19Q695T7 634 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 H3F3CQ6NXT2 135 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 LINC00696Q6ZRV3 163 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 FRMD7Q6ZUT3 714 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 HOMEZQ8IX15 550 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 SIRT6Q8N6T7 355 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 TMEM52Q8NDY8 209 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 METTL6Q8TCB7 284 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 TANKQ92844 425 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 ZNF354BQ96LW1 612 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 ZNF717Q9BY31 904 aaPredicted RBP11.7□□□□□ -0.54
SLIRP-209ENST00000557342 MFRPQ9BY79 579 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 EPN3Q9H201 632 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 RPF2Q9H7B2 306 aaKnown RBP11.7□□□□□ -0.54
SLIRP-209ENST00000557342 WDR41Q9HAD4 459 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 ZBTB20Q9HC78 741 aaPredicted RBP11.7□□□□□ -0.54
SLIRP-209ENST00000557342 MID1IP1Q9NPA3 183 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 ADAP2Q9NPF8 381 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 ABI3Q9P2A4 366 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 SLC12A4Q9UP95 1085 aa11.7□□□□□ -0.54
SLIRP-209ENST00000557342 TTLL8A6PVC2 850 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 A8MUA0 341 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 J3QKU1 62 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 MANBAO00462 879 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 TRIM13O60858 407 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 GUCY1B2O75343 617 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 FAM58BPP0C7Q3 252 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 ARG2P78540 354 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 TLE1Q04724 770 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 ZNF844Q08AG5 666 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 CSTF3Q12996 717 aaKnown RBP11.69□□□□□ -0.54
SLIRP-209ENST00000557342 ELAVL1Q15717 326 aaKnown RBP11.69□□□□□ -0.54
SLIRP-209ENST00000557342 MEP1AQ16819 746 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 MRM1Q6IN84 353 aaKnown RBP11.69□□□□□ -0.54
SLIRP-209ENST00000557342 Q6ZS92 163 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 CLNKQ7Z7G1 428 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 METTL4Q8N3J2 472 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 TMEM132CQ8N3T6 1108 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 SLC5A8Q8N695 610 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 GBP7Q8N8V2 638 aaPredicted RBP11.69□□□□□ -0.54
SLIRP-209ENST00000557342 B3GNT7Q8NFL0 401 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 DNAJB14Q8TBM8 379 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 ELP5Q8TE02 316 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 AGAP11Q8TF27 550 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 SREK1Q8WXA9 508 aaKnown RBP11.69□□□□□ -0.54
SLIRP-209ENST00000557342 FAM111AQ96PZ2 611 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 ALOXE3Q9BYJ1 711 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 RNF32Q9H0A6 362 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 ILKAPQ9H0C8 392 aaPredicted RBP11.69□□□□□ -0.54
SLIRP-209ENST00000557342 C12orf65Q9H3J6 166 aaKnown RBP11.69□□□□□ -0.54
SLIRP-209ENST00000557342 PNO1Q9NRX1 252 aaKnown RBP11.69□□□□□ -0.54
SLIRP-209ENST00000557342 FARSBQ9NSD9 589 aaKnown RBP11.69□□□□□ -0.54
SLIRP-209ENST00000557342 VPS29Q9UBQ0 182 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 VTI1BQ9UEU0 232 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 BSNQ9UPA5 3926 aa11.69□□□□□ -0.54
SLIRP-209ENST00000557342 SMG1Q96Q15 3661 aaKnown RBP11.68□□□□□ -0.54
SLIRP-209ENST00000557342 SERTM1A2A2V5 107 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms