RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 KCNS2Q9ULS6 477 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 KLHL20Q9Y2M5 609 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 KCNE2Q9Y6J6 123 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 SPENQ96T58 3664 aaKnown RBP3.55□□□□□ -1.84
CHD8-212ENST00000557329 SETD2Q9BYW2 2564 aaPredicted RBP3.55□□□□□ -1.84
CHD8-212ENST00000557329 IGLV5-45A0A087WSX0 123 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 EDDM13A0A1B0GTR0 161 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 ZCWPW2A0A1B0GU75 182 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 GOLGA6L7A0A1B0GV03 622 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 A6NCN8 305 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 FAM90A26D6RGX4 464 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 ANKRD28O15084 1053 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 DUX1O43812 170 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 PCDH7O60245 1069 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 SOCS5O75159 536 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 GPC4O75487 556 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 BEST1O76090 585 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 NKX2-2O95096 273 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 MOCS3O95396 460 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 PAK4O96013 591 aaPredicted RBP3.55□□□□□ -1.84
CHD8-212ENST00000557329 PENKP01210 267 aaPredicted RBP3.55□□□□□ -1.84
CHD8-212ENST00000557329 DLATP10515 647 aaKnown RBP3.55□□□□□ -1.84
CHD8-212ENST00000557329 CCL4P13236 92 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 HLA-DOBP13765 273 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 CCDC130P13994 396 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 MYOD1P15172 320 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 MUTP22033 750 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 WARSP23381 471 aaKnown RBP3.55□□□□□ -1.84
CHD8-212ENST00000557329 CSKP41240 450 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 NR2C2P49116 596 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 SGCGQ13326 291 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 ENPP2Q13822 863 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 CRYMQ14894 314 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 RBBP5Q15291 538 aaKnown RBP3.55□□□□□ -1.84
CHD8-212ENST00000557329 NADK2Q4G0N4 442 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 FAM46CQ5VWP2 391 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 ADAM5Q6NVV9 412 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 SLC39A4Q6P5W5 647 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 RFWD3Q6PCD5 774 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 GLDNQ6ZMI3 551 aaPredicted RBP3.55□□□□□ -1.84
CHD8-212ENST00000557329 KCTD8Q6ZWB6 473 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 RUFY3Q7L099 469 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 SMIM29Q86T20 159 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 ZNF329Q86UD4 541 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 ADIPOR2Q86V24 386 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 GPBP1Q86WP2 473 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 NRROSQ86YC3 692 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 MFN1Q8IWA4 741 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 CCDC13Q8IYE1 715 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 LRRC52Q8N7C0 313 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 NECAB1Q8N987 351 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 SYT2Q8N9I0 419 aaPredicted RBP3.55□□□□□ -1.84
CHD8-212ENST00000557329 OR1J2Q8NGS2 313 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 SLC2A14Q8TDB8 520 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 RNF139Q8WU17 664 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 NDRG1Q92597 394 aaKnown RBP3.55□□□□□ -1.84
CHD8-212ENST00000557329 NAT6Q93015 286 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 ZNF274Q96GC6 653 aaPredicted RBP3.55□□□□□ -1.84
CHD8-212ENST00000557329 SMARCD1Q96GM5 515 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 TIPINQ9BVW5 301 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 SLC2A11Q9BYW1 496 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 SPRY4Q9C004 299 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 LRRN3Q9H3W5 708 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 SUDS3Q9H7L9 328 aaPredicted RBP3.55□□□□□ -1.84
CHD8-212ENST00000557329 PARVGQ9HBI0 331 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 ZFP57Q9NU63 452 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 PDRG1Q9NUG6 133 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 OSER1Q9NX31 292 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 GDAP2Q9NXN4 497 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 SPASTQ9UBP0 616 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 NOL7Q9UMY1 257 aaKnown RBP3.55□□□□□ -1.84
CHD8-212ENST00000557329 TMEM184BQ9Y519 407 aaPredicted RBP3.55□□□□□ -1.84
CHD8-212ENST00000557329 RNF215Q9Y6U7 377 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 U3KQA8 63 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 ESPL1Q14674 2120 aa3.55□□□□□ -1.84
CHD8-212ENST00000557329 MYH11P35749 1972 aa3.54□□□□□ -1.84
CHD8-212ENST00000557329 ITPR2Q14571 2701 aa3.54□□□□□ -1.84
CHD8-212ENST00000557329 A8MU76 341 aa3.54□□□□□ -1.84
CHD8-212ENST00000557329 J3KRW8 73 aa3.54□□□□□ -1.84
CHD8-212ENST00000557329 KPNA3O00505 521 aaPredicted RBP3.54□□□□□ -1.84
CHD8-212ENST00000557329 CLIC2O15247 247 aa3.54□□□□□ -1.84
CHD8-212ENST00000557329 INPP4BO15327 924 aa3.54□□□□□ -1.84
CHD8-212ENST00000557329 GRID2O43424 1007 aa3.54□□□□□ -1.84
CHD8-212ENST00000557329 FAM189A1O60320 539 aa3.54□□□□□ -1.84
CHD8-212ENST00000557329 RAD1O60671 282 aa3.54□□□□□ -1.84
CHD8-212ENST00000557329 GCNT3O95395 438 aa3.54□□□□□ -1.84
CHD8-212ENST00000557329 AGR2O95994 175 aa3.54□□□□□ -1.84
CHD8-212ENST00000557329 IGHV4-39P01824 125 aa3.54□□□□□ -1.84
CHD8-212ENST00000557329 ADRB2P07550 413 aa3.54□□□□□ -1.84
CHD8-212ENST00000557329 INHBAP08476 426 aa3.54□□□□□ -1.84
CHD8-212ENST00000557329 FAM200BP0CF97 657 aa3.54□□□□□ -1.84
CHD8-212ENST00000557329 GIMD1P0DJR0 217 aa3.54□□□□□ -1.84
CHD8-212ENST00000557329 HNRNPA2B1P22626 353 aaKnown RBP3.54□□□□□ -1.84
CHD8-212ENST00000557329 NR2F2P24468 414 aa3.54□□□□□ -1.84
CHD8-212ENST00000557329 NFKBIAP25963 317 aa3.54□□□□□ -1.84
CHD8-212ENST00000557329 CD82P27701 267 aa3.54□□□□□ -1.84
CHD8-212ENST00000557329 OAS2P29728 719 aaKnown RBP3.54□□□□□ -1.84
CHD8-212ENST00000557329 ALDH4A1P30038 563 aa3.54□□□□□ -1.84
CHD8-212ENST00000557329 APOBEC1P41238 236 aaKnown RBP3.54□□□□□ -1.84
CHD8-212ENST00000557329 LEPRP48357 1165 aaKnown RBP3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms