RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 AHCTF1Q8WYP5 2266 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 MYOCOSA0A1B0GUC4 107 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 GNG14A0A1W2PPG7 69 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 GLOD5A6NK44 160 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 TRPC5OSA6NMA1 111 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 TGFBR3LH3BV60 316 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 PGRMC2O15173 223 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 DIAPH2O60879 1101 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 AIFM1O95831 613 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 BCKDHAP12694 445 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 SDC1P18827 310 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 CPN2P22792 545 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 LSP1P33241 339 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 TAS2R50P59544 299 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 RPS15P62841 145 aaKnown RBP12.07□□□□□ -0.48
SHMT2-227ENST00000557269 MC1RQ01726 317 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 OCA2Q04671 838 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 EMX2Q04743 252 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 IL10RAQ13651 578 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 PRSS53Q2L4Q9 553 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 IL23RQ5VWK5 629 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 MED25Q71SY5 747 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 HOMEZQ8IX15 550 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 SPACA3Q8IXA5 215 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 AMER2Q8N7J2 671 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 FNDC5Q8NAU1 212 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 OR2Y1Q8NGV0 311 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 CLHC1Q8NHS4 586 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 NUDT8Q8WV74 236 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 ZCCHC14Q8WYQ9 949 aaKnown RBP12.07□□□□□ -0.48
SHMT2-227ENST00000557269 METTL2AQ96IZ6 378 aaKnown RBP12.07□□□□□ -0.48
SHMT2-227ENST00000557269 DCBLD2Q96PD2 775 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 OR1F2PQ96R84 312 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 GPR87Q9BY21 358 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 VN1R1Q9GZP7 353 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 PFDN4Q9NQP4 134 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 LYARQ9NX58 379 aaKnown RBP12.07□□□□□ -0.48
SHMT2-227ENST00000557269 CCDC88CQ9P219 2028 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 HEY2Q9UBP5 337 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 DCTN4Q9UJW0 460 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 MKL2Q9ULH7 1088 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 EXO1Q9UQ84 846 aaKnown RBP12.07□□□□□ -0.48
SHMT2-227ENST00000557269 SSUH2Q9Y2M2 353 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 PCDHGA6Q9Y5G7 932 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 CLDN16Q9Y5I7 305 aa12.07□□□□□ -0.48
SHMT2-227ENST00000557269 PCSK5Q92824 1860 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 A0A1W2PS29 197 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 IDSB3KWA1 339 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 PSMD12O00232 456 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-227ENST00000557269 TGDSO95455 350 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 IL3P08700 152 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 FURINP09958 794 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 ALDOCP09972 364 aaKnown RBP12.06□□□□□ -0.48
SHMT2-227ENST00000557269 LBPP18428 481 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 MAOAP21397 527 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 ITPKBP27987 946 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 FOLR3P41439 243 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 DIO3P55073 304 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 GNGT1P63211 74 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 RHAGQ02094 409 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 TNFRSF17Q02223 184 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 ID2Q02363 134 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 LSM12Q3MHD2 195 aaKnown RBP12.06□□□□□ -0.48
SHMT2-227ENST00000557269 TUBB8Q3ZCM7 444 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 MINDY4Q4G0A6 757 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 ATP1A1-AS1Q5TC04 95 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 NDUFAF5Q5TEU4 345 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 MFSD4BQ5TF39 518 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 TMEM198Q66K66 360 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 FAAH2Q6GMR7 532 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 CLNKQ7Z7G1 428 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 PROSER1Q86XN7 944 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 OR4N5Q8IXE1 308 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 LIX1Q8N485 282 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 CDC26Q8NHZ8 85 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 ACTRT2Q8TDY3 377 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 TSLPQ969D9 159 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 KIAA1143Q96AT1 154 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-227ENST00000557269 ANKRD9Q96BM1 317 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-227ENST00000557269 DPH1Q9BZG8 443 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 NECTIN3Q9NQS3 549 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 C14orf105Q9NVL8 296 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 C5AR2Q9P296 337 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 PHF11Q9UIL8 331 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 C3orf18Q9UK00 162 aa12.06□□□□□ -0.48
SHMT2-227ENST00000557269 SCN2AQ99250 2005 aa12.05□□□□□ -0.48
SHMT2-227ENST00000557269 IGKV3D-11A0A0A0MRZ8 115 aa12.05□□□□□ -0.48
SHMT2-227ENST00000557269 NKX2-8O15522 239 aa12.05□□□□□ -0.48
SHMT2-227ENST00000557269 LDB3O75112 727 aa12.05□□□□□ -0.48
SHMT2-227ENST00000557269 VPS4BO75351 444 aa12.05□□□□□ -0.48
SHMT2-227ENST00000557269 CREG1O75629 220 aa12.05□□□□□ -0.48
SHMT2-227ENST00000557269 MYO1DO94832 1006 aa12.05□□□□□ -0.48
SHMT2-227ENST00000557269 NR2F6P10588 404 aa12.05□□□□□ -0.48
SHMT2-227ENST00000557269 G6PDP11413 515 aa12.05□□□□□ -0.48
SHMT2-227ENST00000557269 IL10P22301 178 aa12.05□□□□□ -0.48
SHMT2-227ENST00000557269 EMP2P54851 167 aa12.05□□□□□ -0.48
SHMT2-227ENST00000557269 TRA2BP62995 288 aaKnown RBP12.05□□□□□ -0.48
SHMT2-227ENST00000557269 ERVK-8P63133 956 aa12.05□□□□□ -0.48
SHMT2-227ENST00000557269 ZNF763Q0D2J5 394 aa12.05□□□□□ -0.48
SHMT2-227ENST00000557269 PTGR1Q14914 329 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms