RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 SCN2AQ99250 2005 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 A0A1W2PPM1 405 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 TCRBV16S1A1N1A0A5B0 115 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 FAM227AF5H4B4 570 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 FOXE1O00358 373 aaPredicted RBP13.22□□□□□ -0.29
SLIRP-207ENST00000556831 RTCAO00442 366 aaKnown RBP13.22□□□□□ -0.29
SLIRP-207ENST00000556831 DYRK3O43781 588 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 CRCPO75575 148 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 KRT6AP02538 564 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 KRT6BP04259 564 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 CELA2AP08217 269 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 ITGAMP11215 1152 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 COX7A2P14406 83 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 ATP5A1P25705 553 aaKnown RBP13.22□□□□□ -0.29
SLIRP-207ENST00000556831 PPP2R1BP30154 601 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 KRT6CP48668 564 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 CDH13P55290 713 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 BTG2P78543 158 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 CLCQ05315 142 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 TRAF3Q13114 568 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 SLAMF1Q13291 335 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 CUL3Q13618 768 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 TLR1Q15399 786 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 IGFBP7Q16270 282 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 SGO1Q5FBB7 561 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 ZNF678Q5SXM1 525 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 GPRIN3Q6ZVF9 776 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 CCNYL1Q8N7R7 359 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 RBMXL3Q8N7X1 1067 aaKnown RBP13.22□□□□□ -0.29
SLIRP-207ENST00000556831 OR2W6PQ8NHA6 318 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 RDH11Q8TC12 318 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 CPT1CQ8TCG5 803 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 MZB1Q8WU39 189 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 SELENOMQ8WWX9 145 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 SREK1Q8WXA9 508 aaKnown RBP13.22□□□□□ -0.29
SLIRP-207ENST00000556831 IMMP1LQ96LU5 166 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 ZNF354BQ96LW1 612 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 TMEM237Q96Q45 408 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 C1QTNF3Q9BXJ4 246 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 SLC29A3Q9BZD2 475 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.22□□□□□ -0.29
SLIRP-207ENST00000556831 MMP25Q9NPA2 562 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 PRDM7Q9NQW5 492 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 PNO1Q9NRX1 252 aaKnown RBP13.22□□□□□ -0.29
SLIRP-207ENST00000556831 TRPS1Q9UHF7 1281 aa13.22□□□□□ -0.29
SLIRP-207ENST00000556831 SAGE2PA6NJ88 616 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 A8MUA0 341 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 PLPP1O14494 284 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 DLX3O60479 287 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 VPS4BO75351 444 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 MYO1DO94832 1006 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 SEMA3DO95025 777 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 TBX6O95947 436 aaPredicted RBP13.21□□□□□ -0.29
SLIRP-207ENST00000556831 TSPAN8P19075 237 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 IMPDH1P20839 514 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 CRHR1P34998 444 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 NEK2P51955 445 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 PRKAA2P54646 552 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 MLLT10P55197 1068 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 SLC26A5P58743 744 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 ASPHQ12797 758 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 LCP2Q13094 533 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 SERTAD2Q14140 314 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 ZNF169Q14929 603 aaPredicted RBP13.21□□□□□ -0.29
SLIRP-207ENST00000556831 PRR30Q53SZ7 412 aaPredicted RBP13.21□□□□□ -0.29
SLIRP-207ENST00000556831 FAM219BQ5XKK7 198 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 ZYG11AQ6WRX3 759 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 CLNKQ7Z7G1 428 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 GPR180Q86V85 440 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 C4orf33Q8N1A6 199 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 ZCCHC7Q8N3Z6 543 aaKnown RBP13.21□□□□□ -0.29
SLIRP-207ENST00000556831 RNF175Q8N4F7 328 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 WDR20Q8TBZ3 569 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 ZNF382Q96SR6 550 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 MAPKAP1Q9BPZ7 522 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 PARD6BQ9BYG5 372 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 ROPN1BQ9BZX4 212 aaPredicted RBP13.21□□□□□ -0.29
SLIRP-207ENST00000556831 ACBD3Q9H3P7 528 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 ROPN1Q9HAT0 212 aaPredicted RBP13.21□□□□□ -0.29
SLIRP-207ENST00000556831 ZBTB26Q9HCK0 441 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 ADAP2Q9NPF8 381 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 NECTIN3Q9NQS3 549 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 PSD3Q9NYI0 1048 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 PPT2Q9UMR5 302 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 VPS4AQ9UN37 437 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 SLC12A4Q9UP95 1085 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 CSAG2Q9Y5P2 127 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 CLCA3PQ9Y6N3 262 aa13.21□□□□□ -0.29
SLIRP-207ENST00000556831 H3BQF6 201 aa13.2□□□□□ -0.3
SLIRP-207ENST00000556831 CTNSO60931 367 aa13.2□□□□□ -0.3
SLIRP-207ENST00000556831 SORBS2O94875 1100 aaKnown RBP13.2□□□□□ -0.3
SLIRP-207ENST00000556831 SCELO95171 688 aa13.2□□□□□ -0.3
SLIRP-207ENST00000556831 SBK3P0C264 359 aa13.2□□□□□ -0.3
SLIRP-207ENST00000556831 TNNI3P19429 210 aa13.2□□□□□ -0.3
SLIRP-207ENST00000556831 SOX11P35716 441 aa13.2□□□□□ -0.3
SLIRP-207ENST00000556831 PKNOX1P55347 436 aa13.2□□□□□ -0.3
SLIRP-207ENST00000556831 TERF2Q15554 542 aa13.2□□□□□ -0.3
SLIRP-207ENST00000556831 MEP1AQ16819 746 aa13.2□□□□□ -0.3
SLIRP-207ENST00000556831 IGFL2Q6UWQ7 119 aa13.2□□□□□ -0.3
SLIRP-207ENST00000556831 ZNF793Q6ZN11 406 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms