RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 ILVBLA1L0T0 632 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 A1L4Q6 167 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 HEATR9A2RTY3 570 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 LINC01548A6NM66 108 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 TCP11X1B4DZS4 312 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 I6L893 689 aaPredicted RBP4.92□□□□□ -1.62
SRP54-211ENST00000556445 PRRG1O14668 218 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 KLF11O14901 512 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 BIRC5O15392 142 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 RGS10O43665 173 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 GMFGO60234 142 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 GPRIN2O60269 458 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 SNX3O60493 162 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 GLRA3O75311 464 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 SPAG7O75391 227 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 CLDN11O75508 207 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 DCTN3O75935 186 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 ATP5HO75947 161 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 FGF19O95750 216 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 IL1BP01584 269 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 EPOP01588 193 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 HOXB8P17481 243 aaPredicted RBP4.92□□□□□ -1.62
SRP54-211ENST00000556445 ADRA2CP18825 462 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 ADRA1DP25100 572 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 OR1E1P30953 314 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 NTSR1P30989 418 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 SOAT1P35610 550 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 HNF1BP35680 557 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 TAGLN2P37802 199 aaKnown RBP4.92□□□□□ -1.62
SRP54-211ENST00000556445 FASLGP48023 281 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 PCP4P48539 62 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 CENPAP49450 140 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 CAMPP49913 170 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 GATMP50440 423 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 KPNA2P52292 529 aaKnown RBP4.92□□□□□ -1.62
SRP54-211ENST00000556445 DGKEP52429 567 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 MVDP53602 400 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 EEFSECP57772 596 aaKnown RBP4.92□□□□□ -1.62
SRP54-211ENST00000556445 ST8SIA6P61647 398 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 PDE1BQ01064 536 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 CDK18Q07002 472 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 SRSF4Q08170 494 aaKnown RBP4.92□□□□□ -1.62
SRP54-211ENST00000556445 ZBTB17Q13105 803 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 AAK1Q2M2I8 961 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 CCDC153Q494R4 210 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 AARDQ4LEZ3 155 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 SH2D4BQ5SQS7 431 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 SDHAF4Q5VUM1 108 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 SUMO4Q6EEV6 95 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 FBXL22Q6P050 247 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 PRSS55Q6UWB4 352 aaPredicted RBP4.92□□□□□ -1.62
SRP54-211ENST00000556445 KIAA1324Q6UXG2 1013 aaKnown RBP4.92□□□□□ -1.62
SRP54-211ENST00000556445 PACS1Q6VY07 963 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 SPATA21Q7Z572 469 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 SETD3Q86TU7 594 aaPredicted RBP4.92□□□□□ -1.62
SRP54-211ENST00000556445 ZNF683Q8IZ20 524 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 C4orf33Q8N1A6 199 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 ELMOD1Q8N336 334 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 ZCCHC7Q8N3Z6 543 aaKnown RBP4.92□□□□□ -1.62
SRP54-211ENST00000556445 TEX26Q8N6G2 289 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 SEMA6DQ8NFY4 1073 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 OR52E1Q8NGJ3 308 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 TCP10LQ8TDR4 215 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 METTL21AQ8WXB1 218 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 RAB40AQ8WXH6 277 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 ARNTL2Q8WYA1 636 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 DDB2Q92466 427 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 PEX13Q92968 403 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 R3HDM4Q96D70 268 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 SGF29Q96ES7 293 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 MMABQ96EY8 250 aaPredicted RBP4.92□□□□□ -1.62
SRP54-211ENST00000556445 C5orf30Q96GV9 206 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 CELF6Q96J87 481 aaKnown RBP4.92□□□□□ -1.62
SRP54-211ENST00000556445 RPRD1AQ96P16 312 aaPredicted RBP4.92□□□□□ -1.62
SRP54-211ENST00000556445 HIST1H2AAQ96QV6 131 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 RANBP9Q96S59 729 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 SIKE1Q9BRV8 207 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 KIFC1Q9BW19 673 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 MTIF3Q9H2K0 278 aaKnown RBP4.92□□□□□ -1.62
SRP54-211ENST00000556445 EHD1Q9H4M9 534 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 NGBQ9NPG2 151 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 DUSP22Q9NRW4 184 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 OLAHQ9NV23 265 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 DNAJC11Q9NVH1 559 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 ARL8BQ9NVJ2 186 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 THAP1Q9NVV9 213 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 RBM22Q9NW64 420 aaKnown RBP eCLIP4.92□□□□□ -1.62
SRP54-211ENST00000556445 OSER1Q9NX31 292 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 P4HTMQ9NXG6 502 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 NCKIPSDQ9NZQ3 722 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 LSM7Q9UK45 103 aaKnown RBP4.92□□□□□ -1.62
SRP54-211ENST00000556445 FBXW2Q9UKT8 454 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 RIMKLBQ9ULI2 386 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 NEU3Q9UQ49 428 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 PLLPQ9Y342 182 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 STRAPQ9Y3F4 350 aaKnown RBP4.92□□□□□ -1.62
SRP54-211ENST00000556445 YIPF1Q9Y548 306 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 USH1CQ9Y6N9 552 aa4.92□□□□□ -1.62
SRP54-211ENST00000556445 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.91□□□□□ -1.62
SRP54-211ENST00000556445 EDDM13A0A1B0GTR0 161 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms