RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 CUTCQ9NTM9 273 aa9.65□□□□□ -0.86
SRP54-208ENST00000555557 SERTAD3Q9UJW9 196 aa9.65□□□□□ -0.86
SRP54-208ENST00000555557 PCDHGA7Q9Y5G6 932 aa9.65□□□□□ -0.86
SRP54-208ENST00000555557 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.65□□□□□ -0.86
SRP54-208ENST00000555557 RIF1Q5UIP0 2472 aaKnown RBP9.65□□□□□ -0.87
SRP54-208ENST00000555557 A0A088AWK7 358 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 A0A1W2PS29 197 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 DYTNA2CJ06 578 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 FXYD1O00168 92 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 ZNF749O43361 778 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 SORBS2O94875 1100 aaKnown RBP9.64□□□□□ -0.87
SRP54-208ENST00000555557 CPSF4O95639 269 aaKnown RBP9.64□□□□□ -0.87
SRP54-208ENST00000555557 C1QCP02747 245 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 ZNF10P21506 573 aaPredicted RBP9.64□□□□□ -0.87
SRP54-208ENST00000555557 CPN2P22792 545 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 CSTF2P33240 577 aaKnown RBP eCLIP9.64□□□□□ -0.87
SRP54-208ENST00000555557 OR1D4P47884 311 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 ITGA1P56199 1179 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 SIM1P81133 766 aaPredicted RBP9.64□□□□□ -0.87
SRP54-208ENST00000555557 FAM53BQ14153 422 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 ZNF750Q32MQ0 723 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 GTDC1Q4AE62 458 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 DLEU7Q6UYE1 221 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 R3HCC1LQ7Z5L2 792 aaKnown RBP9.64□□□□□ -0.87
SRP54-208ENST00000555557 CAMKMTQ7Z624 323 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 CA13Q8N1Q1 262 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 TTC29Q8NA56 475 aaPredicted RBP9.64□□□□□ -0.87
SRP54-208ENST00000555557 DEFB124Q8NES8 71 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 DNAJB14Q8TBM8 379 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.64□□□□□ -0.87
SRP54-208ENST00000555557 STARD8Q92502 1023 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 CDC6Q99741 560 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 CTRCQ99895 268 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 FAIM2Q9BWQ8 316 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 RBCK1Q9BYM8 510 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 LYARQ9NX58 379 aaKnown RBP9.64□□□□□ -0.87
SRP54-208ENST00000555557 TOR4AQ9NXH8 423 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 HCN3Q9P1Z3 774 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 NDOR1Q9UHB4 597 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 CROTQ9UKG9 612 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 UTS2RQ9UKP6 389 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 CLCA2Q9UQC9 943 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 PCDHA9Q9Y5H5 950 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 PRSS51A0A1B0GVH4 220 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 EFCAB7A8K855 629 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 RFXANKO14593 260 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 CHST10O43529 356 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 ERAL1O75616 437 aaKnown RBP9.64□□□□□ -0.87
SRP54-208ENST00000555557 RFPL3O75679 317 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 DNAJC8O75937 253 aaPredicted RBP9.64□□□□□ -0.87
SRP54-208ENST00000555557 TIAF1O95411 115 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 ABCB1P08183 1280 aaPredicted RBP9.64□□□□□ -0.87
SRP54-208ENST00000555557 MSL3P1P0C860 447 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 C8orf89P0DMQ9 161 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 CCL4P13236 92 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 DRD2P14416 443 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 PTGER1P34995 402 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 HNRNPFP52597 415 aaKnown RBP9.64□□□□□ -0.87
SRP54-208ENST00000555557 PSME3P61289 254 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 SHC2P98077 582 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 INSM1Q01101 510 aaPredicted RBP9.64□□□□□ -0.87
SRP54-208ENST00000555557 ACY1Q03154 408 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 ERV3-1Q14264 604 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 TRIP6Q15654 476 aaKnown RBP9.64□□□□□ -0.87
SRP54-208ENST00000555557 CLPPQ16740 277 aaPredicted RBP9.64□□□□□ -0.87
SRP54-208ENST00000555557 DPY19L1Q2PZI1 675 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 FAM214AQ32MH5 1076 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 COQ5Q5HYK3 327 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 C1orf189Q5VU69 101 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 GARNL3Q5VVW2 1013 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 C16orf89Q6UX73 402 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 DHDDSQ86SQ9 333 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 PIP4P1Q86T03 277 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 OR4N5Q8IXE1 308 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 CLEC4FQ8N1N0 589 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 DPP10Q8N608 796 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 RNF148Q8N7C7 305 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 TMEM52Q8NDY8 209 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 MTERF3Q96E29 417 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 CDRT15Q96T59 188 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 BHLHE41Q9C0J9 482 aaPredicted RBP9.64□□□□□ -0.87
SRP54-208ENST00000555557 RMND5AQ9H871 391 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 FANCEQ9HB96 536 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 SLAMF7Q9NQ25 335 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 ATAD3AQ9NVI7 634 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 SIDT1Q9NXL6 827 aaKnown RBP9.64□□□□□ -0.87
SRP54-208ENST00000555557 VAPAQ9P0L0 249 aa9.64□□□□□ -0.87
SRP54-208ENST00000555557 WBP11Q9Y2W2 641 aaKnown RBP9.64□□□□□ -0.87
SRP54-208ENST00000555557 COL5A1P20908 1838 aaPredicted RBP9.63□□□□□ -0.87
SRP54-208ENST00000555557 FAM186AA6NE01 2351 aa9.63□□□□□ -0.87
SRP54-208ENST00000555557 MYOCOSA0A1B0GUC4 107 aa9.63□□□□□ -0.87
SRP54-208ENST00000555557 C1orf226A1L170 272 aa9.63□□□□□ -0.87
SRP54-208ENST00000555557 GUCY1B2O75343 617 aa9.63□□□□□ -0.87
SRP54-208ENST00000555557 PDE5AO76074 875 aa9.63□□□□□ -0.87
SRP54-208ENST00000555557 KCNH1O95259 989 aa9.63□□□□□ -0.87
SRP54-208ENST00000555557 NSA2O95478 260 aaKnown RBP9.63□□□□□ -0.87
SRP54-208ENST00000555557 C6orf47O95873 294 aa9.63□□□□□ -0.87
SRP54-208ENST00000555557 NR2F6P10588 404 aa9.63□□□□□ -0.87
SRP54-208ENST00000555557 NQO1P15559 274 aaKnown RBP9.63□□□□□ -0.87
SRP54-208ENST00000555557 PGM1P36871 562 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms