RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 FER1L6-AS2Q96M78 137 aa2.41□□□□□ -2.02
SNX6-204ENST00000555541 PRMT1Q99873 361 aaKnown RBP2.41□□□□□ -2.02
SNX6-204ENST00000555541 CCM2Q9BSQ5 444 aa2.41□□□□□ -2.02
SNX6-204ENST00000555541 UBE2TQ9NPD8 197 aaPredicted RBP2.41□□□□□ -2.02
SNX6-204ENST00000555541 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.41□□□□□ -2.02
SNX6-204ENST00000555541 ZNF275Q9NSD4 429 aaPredicted RBP2.41□□□□□ -2.02
SNX6-204ENST00000555541 CLIC5Q9NZA1 410 aa2.41□□□□□ -2.02
SNX6-204ENST00000555541 SH3GLB1Q9Y371 365 aa2.41□□□□□ -2.02
SNX6-204ENST00000555541 OR5H15A6NDH6 313 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 ZNF487B1APH4 448 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 FAM86B1E9PN63 330 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 TSC22D2O75157 780 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 RHBDL1O75783 438 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 FAM86B2P0C5J1 330 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 SKILP12757 684 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 ADRA2CP18825 462 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 TIA1P31483 386 aaKnown RBP eCLIP2.4□□□□□ -2.03
SNX6-204ENST00000555541 TNFRSF4P43489 277 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 CRKLP46109 303 aaKnown RBP2.4□□□□□ -2.03
SNX6-204ENST00000555541 BRCC3P46736 316 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 RGRP47804 291 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 OR3A1P47881 315 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 MEOX2P50222 304 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 RAD23AP54725 363 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 HMGCS2P54868 508 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 CETN1Q12798 172 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 GPR50Q13585 617 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 CEACAM7Q14002 265 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 LIPJQ5W064 366 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 C16orf54Q6UWD8 224 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 TMEM182Q6ZP80 229 aaPredicted RBP2.4□□□□□ -2.03
SNX6-204ENST00000555541 NLRP14Q86W24 1093 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 CREBRFQ8IUR6 639 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 CCDC71Q8IV32 467 aaPredicted RBP2.4□□□□□ -2.03
SNX6-204ENST00000555541 ZNF525Q8N782 197 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 RIT1Q92963 219 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 ESAMQ96AP7 390 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 NTNG2Q96CW9 530 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 SIGLEC12Q96PQ1 595 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 VNN3Q9NY84 501 aa2.4□□□□□ -2.03
SNX6-204ENST00000555541 C5orf52A6NGY3 159 aa2.39□□□□□ -2.03
SNX6-204ENST00000555541 TSPY2A6NKD2 308 aa2.39□□□□□ -2.03
SNX6-204ENST00000555541 SCO2O43819 266 aa2.39□□□□□ -2.03
SNX6-204ENST00000555541 OR9G9P0C7N8 305 aa2.39□□□□□ -2.03
SNX6-204ENST00000555541 PDGFRAP16234 1089 aa2.39□□□□□ -2.03
SNX6-204ENST00000555541 PTAFRP25105 342 aa2.39□□□□□ -2.03
SNX6-204ENST00000555541 ACKR3P25106 362 aa2.39□□□□□ -2.03
SNX6-204ENST00000555541 CRMP1Q14194 572 aa2.39□□□□□ -2.03
SNX6-204ENST00000555541 CDO1Q16878 200 aa2.39□□□□□ -2.03
SNX6-204ENST00000555541 SHEQ5VZ18 495 aa2.39□□□□□ -2.03
SNX6-204ENST00000555541 FAM91A1Q658Y4 838 aa2.39□□□□□ -2.03
SNX6-204ENST00000555541 ZNF776Q68DI1 518 aaPredicted RBP2.39□□□□□ -2.03
SNX6-204ENST00000555541 TIGD4Q8IY51 512 aa2.39□□□□□ -2.03
SNX6-204ENST00000555541 KIF18AQ8NI77 898 aa2.39□□□□□ -2.03
SNX6-204ENST00000555541 SAP25Q8TEE9 199 aa2.39□□□□□ -2.03
SNX6-204ENST00000555541 INPP5KQ9BT40 448 aa2.39□□□□□ -2.03
SNX6-204ENST00000555541 MTIF3Q9H2K0 278 aaKnown RBP2.39□□□□□ -2.03
SNX6-204ENST00000555541 ASB8Q9H765 288 aa2.39□□□□□ -2.03
SNX6-204ENST00000555541 VIPAS39Q9H9C1 493 aa2.39□□□□□ -2.03
SNX6-204ENST00000555541 S100A14Q9HCY8 104 aa2.39□□□□□ -2.03
SNX6-204ENST00000555541 PDRG1Q9NUG6 133 aa2.39□□□□□ -2.03
SNX6-204ENST00000555541 MED17Q9NVC6 651 aa2.39□□□□□ -2.03
SNX6-204ENST00000555541 ZNF446Q9NWS9 450 aa2.39□□□□□ -2.03
SNX6-204ENST00000555541 CLEC4EQ9ULY5 219 aa2.39□□□□□ -2.03
SNX6-204ENST00000555541 TMCO5BA8MYB1 307 aa2.38□□□□□ -2.03
SNX6-204ENST00000555541 LRRTM2O43300 516 aa2.38□□□□□ -2.03
SNX6-204ENST00000555541 B4GAT1O43505 415 aa2.38□□□□□ -2.03
SNX6-204ENST00000555541 PDGFBP01127 241 aaPredicted RBP2.38□□□□□ -2.03
SNX6-204ENST00000555541 GBAP04062 536 aa2.38□□□□□ -2.03
SNX6-204ENST00000555541 PPP2R1AP30153 589 aa2.38□□□□□ -2.03
SNX6-204ENST00000555541 ALDH3B1P43353 468 aa2.38□□□□□ -2.03
SNX6-204ENST00000555541 NPY4RP50391 375 aa2.38□□□□□ -2.03
SNX6-204ENST00000555541 ABRQ12979 859 aa2.38□□□□□ -2.03
SNX6-204ENST00000555541 ABRAXAS2Q15018 415 aa2.38□□□□□ -2.03
SNX6-204ENST00000555541 SLC22A18ASQ8N1D0 253 aa2.38□□□□□ -2.03
SNX6-204ENST00000555541 SAMD12Q8N8I0 201 aa2.38□□□□□ -2.03
SNX6-204ENST00000555541 GPR148Q8TDV2 347 aa2.38□□□□□ -2.03
SNX6-204ENST00000555541 ZBED6CLQ96FA7 236 aaPredicted RBP2.38□□□□□ -2.03
SNX6-204ENST00000555541 PAXXQ9BUH6 204 aa2.38□□□□□ -2.03
SNX6-204ENST00000555541 NT5DC2Q9H857 520 aa2.38□□□□□ -2.03
SNX6-204ENST00000555541 NKIRAS2Q9NYR9 191 aa2.38□□□□□ -2.03
SNX6-204ENST00000555541 ADAM22Q9P0K1 906 aa2.38□□□□□ -2.03
SNX6-204ENST00000555541 PLEKHA6Q9Y2H5 1048 aa2.38□□□□□ -2.03
SNX6-204ENST00000555541 ANKDD1BA6NHY2 528 aa2.37□□□□□ -2.03
SNX6-204ENST00000555541 NEDD8-MDP1E9PL57 170 aa2.37□□□□□ -2.03
SNX6-204ENST00000555541 CALCAP01258 141 aa2.37□□□□□ -2.03
SNX6-204ENST00000555541 FHP07954 510 aa2.37□□□□□ -2.03
SNX6-204ENST00000555541 MDH2P40926 338 aaKnown RBP2.37□□□□□ -2.03
SNX6-204ENST00000555541 FHITP49789 147 aa2.37□□□□□ -2.03
SNX6-204ENST00000555541 HERC4Q5GLZ8 1057 aaPredicted RBP2.37□□□□□ -2.03
SNX6-204ENST00000555541 NHLRC1Q6VVB1 395 aa2.37□□□□□ -2.03
SNX6-204ENST00000555541 CACUL1Q86Y37 369 aa2.37□□□□□ -2.03
SNX6-204ENST00000555541 ZNF491Q8N8L2 437 aa2.37□□□□□ -2.03
SNX6-204ENST00000555541 SMYD1Q8NB12 490 aa2.37□□□□□ -2.03
SNX6-204ENST00000555541 RNF149Q8NC42 400 aa2.37□□□□□ -2.03
SNX6-204ENST00000555541 SEPT8Q92599 483 aa2.37□□□□□ -2.03
SNX6-204ENST00000555541 ZNF274Q96GC6 653 aaPredicted RBP2.37□□□□□ -2.03
SNX6-204ENST00000555541 CDHR1Q96JP9 859 aa2.37□□□□□ -2.03
SNX6-204ENST00000555541 SDHCQ99643 169 aaPredicted RBP2.37□□□□□ -2.03
SNX6-204ENST00000555541 AMBNQ9NP70 447 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms