RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 GTF2IRD2BQ6EKJ0 949 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 B3GNT8Q7Z7M8 397 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 GTF2IRD2Q86UP8 949 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 HORMAD2Q8N7B1 307 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 SMYD1Q8NB12 490 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 ZNF420Q8TAQ5 688 aaPredicted RBP23.09■■□□□ 1.29
TMEM260-207ENST00000555497 UBE2FQ969M7 185 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 DDX31Q9H8H2 851 aaKnown RBP23.09■■□□□ 1.29
TMEM260-207ENST00000555497 SPHK1Q9NYA1 384 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 CA5BQ9Y2D0 317 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 WBP11Q9Y2W2 641 aaKnown RBP23.09■■□□□ 1.29
TMEM260-207ENST00000555497 GMPPBQ9Y5P6 360 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 C4orf51C9J302 202 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 E9PQ18 207 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 PEBP1P30086 187 aaKnown RBP23.09■■□□□ 1.29
TMEM260-207ENST00000555497 MAPK10P53779 464 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 DSTNP60981 165 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 HSPB3Q12988 150 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 RAB30Q15771 203 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 OR4C11Q6IEV9 310 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 ZNF793Q6ZN11 406 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 NEURL3Q96EH8 262 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 SCARF2Q96GP6 870 aaPredicted RBP23.09■■□□□ 1.29
TMEM260-207ENST00000555497 C17orf62Q9BQA9 187 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 DCUN1D5Q9BTE7 237 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 RAD21L1Q9H4I0 556 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 SYNPO2LQ9H987 977 aa23.09■■□□□ 1.29
TMEM260-207ENST00000555497 LRIT2A6NDA9 550 aa23.08■■□□□ 1.29
TMEM260-207ENST00000555497 J3KTA2 159 aa23.08■■□□□ 1.29
TMEM260-207ENST00000555497 CLEC3AO75596 197 aa23.08■■□□□ 1.29
TMEM260-207ENST00000555497 RECKO95980 971 aa23.08■■□□□ 1.29
TMEM260-207ENST00000555497 CDK4P11802 303 aa23.08■■□□□ 1.29
TMEM260-207ENST00000555497 FRKP42685 505 aaPredicted RBP23.08■■□□□ 1.29
TMEM260-207ENST00000555497 GRSF1Q12849 480 aaKnown RBP eCLIP23.08■■□□□ 1.29
TMEM260-207ENST00000555497 SDE2Q6IQ49 451 aa23.08■■□□□ 1.29
TMEM260-207ENST00000555497 TNFAIP8L2Q6P589 184 aaPredicted RBP23.08■■□□□ 1.29
TMEM260-207ENST00000555497 FBXL6Q8N531 539 aa23.08■■□□□ 1.29
TMEM260-207ENST00000555497 OR4C15Q8NGM1 316 aa23.08■■□□□ 1.29
TMEM260-207ENST00000555497 QRFPRQ96P65 431 aa23.08■■□□□ 1.29
TMEM260-207ENST00000555497 ZNF300Q96RE9 604 aaPredicted RBP23.08■■□□□ 1.29
TMEM260-207ENST00000555497 RSPO3Q9BXY4 272 aaPredicted RBP23.08■■□□□ 1.29
TMEM260-207ENST00000555497 BLOC1S6Q9UL45 172 aa23.08■■□□□ 1.29
TMEM260-207ENST00000555497 RAB23Q9ULC3 237 aa23.08■■□□□ 1.29
TMEM260-207ENST00000555497 NAALAD2Q9Y3Q0 740 aa23.08■■□□□ 1.29
TMEM260-207ENST00000555497 MDC1Q14676 2089 aaKnown RBP23.08■■□□□ 1.29
TMEM260-207ENST00000555497 A0A0A6YYD5 115 aa23.08■■□□□ 1.28
TMEM260-207ENST00000555497 TNFRSF11BO00300 401 aa23.08■■□□□ 1.28
TMEM260-207ENST00000555497 EML2O95834 649 aa23.08■■□□□ 1.28
TMEM260-207ENST00000555497 ANGPTL1O95841 491 aa23.08■■□□□ 1.28
TMEM260-207ENST00000555497 CCDC159P0C7I6 412 aa23.08■■□□□ 1.28
TMEM260-207ENST00000555497 ELOAQ14241 798 aaKnown RBP23.08■■□□□ 1.28
TMEM260-207ENST00000555497 CEACAM20Q6UY09 585 aa23.08■■□□□ 1.28
TMEM260-207ENST00000555497 SETD9Q8NE22 299 aa23.08■■□□□ 1.28
TMEM260-207ENST00000555497 OR52J3Q8NH60 311 aa23.08■■□□□ 1.28
TMEM260-207ENST00000555497 ZNF566Q969W8 418 aa23.08■■□□□ 1.28
TMEM260-207ENST00000555497 PDXPQ96GD0 296 aa23.08■■□□□ 1.28
TMEM260-207ENST00000555497 CNDP2Q96KP4 475 aaKnown RBP23.08■■□□□ 1.28
TMEM260-207ENST00000555497 TRBC2A0A5B9 178 aa23.07■■□□□ 1.28
TMEM260-207ENST00000555497 CACNB4O00305 520 aaPredicted RBP23.07■■□□□ 1.28
TMEM260-207ENST00000555497 HAT1O14929 419 aa23.07■■□□□ 1.28
TMEM260-207ENST00000555497 HYAL2Q12891 473 aa23.07■■□□□ 1.28
TMEM260-207ENST00000555497 NPRL3Q12980 569 aa23.07■■□□□ 1.28
TMEM260-207ENST00000555497 HTR4Q13639 388 aa23.07■■□□□ 1.28
TMEM260-207ENST00000555497 RPS26P11Q5JNZ5 115 aaPredicted RBP23.07■■□□□ 1.28
TMEM260-207ENST00000555497 FEVQ99581 238 aa23.07■■□□□ 1.28
TMEM260-207ENST00000555497 DPH7Q9BTV6 452 aa23.07■■□□□ 1.28
TMEM260-207ENST00000555497 C1QTNF7Q9BXJ2 289 aa23.07■■□□□ 1.28
TMEM260-207ENST00000555497 MVB12BQ9H7P6 319 aa23.07■■□□□ 1.28
TMEM260-207ENST00000555497 MRPS30Q9NP92 439 aaKnown RBP23.07■■□□□ 1.28
TMEM260-207ENST00000555497 RLIMQ9NVW2 624 aa23.07■■□□□ 1.28
TMEM260-207ENST00000555497 ADAM29Q9UKF5 820 aa23.07■■□□□ 1.28
TMEM260-207ENST00000555497 KLHL20Q9Y2M5 609 aa23.07■■□□□ 1.28
TMEM260-207ENST00000555497 NINQ8N4C6 2090 aa23.07■■□□□ 1.28
TMEM260-207ENST00000555497 PCMT1P22061 227 aa23.06■■□□□ 1.28
TMEM260-207ENST00000555497 RPP38P78345 283 aaKnown RBP23.06■■□□□ 1.28
TMEM260-207ENST00000555497 ZIC1Q15915 447 aa23.06■■□□□ 1.28
TMEM260-207ENST00000555497 SMN1Q16637 294 aaKnown RBP23.06■■□□□ 1.28
TMEM260-207ENST00000555497 TPRG1LQ5T0D9 272 aa23.06■■□□□ 1.28
TMEM260-207ENST00000555497 KIAA1614Q5VZ46 1190 aa23.06■■□□□ 1.28
TMEM260-207ENST00000555497 Q6ZPB1 254 aaPredicted RBP23.06■■□□□ 1.28
TMEM260-207ENST00000555497 GIPC3Q8TF64 312 aa23.06■■□□□ 1.28
TMEM260-207ENST00000555497 LZICQ8WZA0 190 aa23.06■■□□□ 1.28
TMEM260-207ENST00000555497 NODALQ96S42 347 aa23.06■■□□□ 1.28
TMEM260-207ENST00000555497 OCEL1Q9H607 264 aa23.06■■□□□ 1.28
TMEM260-207ENST00000555497 THSD1Q9NS62 852 aa23.06■■□□□ 1.28
TMEM260-207ENST00000555497 ANGPT4Q9Y264 503 aa23.06■■□□□ 1.28
TMEM260-207ENST00000555497 PRSS38A1L453 326 aa23.06■■□□□ 1.28
TMEM260-207ENST00000555497 TRIM64BA6NI03 449 aa23.06■■□□□ 1.28
TMEM260-207ENST00000555497 H0Y8X5 98 aa23.06■■□□□ 1.28
TMEM260-207ENST00000555497 PRKRAO75569 313 aaKnown RBP23.06■■□□□ 1.28
TMEM260-207ENST00000555497 SLC5A8Q8N695 610 aa23.06■■□□□ 1.28
TMEM260-207ENST00000555497 SLC38A5Q8WUX1 472 aa23.06■■□□□ 1.28
TMEM260-207ENST00000555497 RAB8BQ92930 207 aa23.06■■□□□ 1.28
TMEM260-207ENST00000555497 RIPOR3Q96MK2 946 aa23.06■■□□□ 1.28
TMEM260-207ENST00000555497 RHNO1Q9BSD3 238 aa23.06■■□□□ 1.28
TMEM260-207ENST00000555497 PREBQ9HCU5 417 aa23.06■■□□□ 1.28
TMEM260-207ENST00000555497 TBC1D29Q9UFV1 150 aa23.06■■□□□ 1.28
TMEM260-207ENST00000555497 SH3GLB1Q9Y371 365 aa23.06■■□□□ 1.28
TMEM260-207ENST00000555497 EYSQ5T1H1 3165 aa23.06■■□□□ 1.28
TMEM260-207ENST00000555497 A0A1W2PPW3 197 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms